Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0769 ATGGAAGAAGCACAAAGGTATGCGGTAGTGACCGGAGCTAATAAGGGGATTGGTTATGGGATATGCAAGAAATTAGCTTCAATTGGTATTGTGGTTATACTTACGGCTAGAAATGAAAAAAGAGGTTTAGAAGCAGTTGAAACATTGAAAGAGTTTGGTCTCTCTGACTTTCTGATTTTTCATCAACTTGATGTGACTGATCCTGCAAGTGTTGCTTCTCTAGCAGATTTCATTAAAACCCAATTTGGAAAACTTGATATCTTGGTGAACAACGCGGGTACTCCTGGCGGAATAGTAGATGGAGAGAATGTTCTTAGAAGGAAAAGGGGTGAATTGTCAGATTGGAATAAAATAGTGCGCCAAAGTTATGAGTTAGCTGAAGAAAGTGTTGAAACAAACTTCTTTGGTACAGAAAGAGTAACTGAAGCTCTTATTCCTCTACTTCAACTATCCAATTCACCTAGGATTGTCAATCTTTCCTCTAGAATGGGAGTATTGCAGAACATACCAAATGAATGGGCAAGAAGAGTGATTGGTGATGACATAGAAAAAAACCTCCTTACAAACAAAAAACTAGGTGAGGTTCTAAGAGAATTTCTAAAAGATTACAAAGAAGGATCATTGAAAACCAAAAACTGGCCAATTGTTGTTTCTGGTTACACAATGTCAAAAGCAGCATTGAATGCTTACACAAGGTTGTTGGCTAAGAAGTTCCCTCATTTTCGCATAAATTGTTTATGCCCTGGCTTTGTAAAAACTGATATAAACCAGAATACAGGGTTTTTAAGCATTGATGAAGGTGCTGAATGTCCTGTTAAGCTAGCTTTGTTGCCAGATAATGGTCCTTCAGGTCTCTTTTATTTCATGGATGAAGTTATTTCCTTTTGA 888 0.3739 MEEAQRYAVVTGANKGIGYGICKKLASIGIVVILTARNEKRGLEAVETLKEFGLSDFLIFHQLDVTDPASVASLADFIKTQFGKLDILVNNAGTPGGIVDGENVLRRKRGELSDWNKIVRQSYELAEESVETNFFGTERVTEALIPLLQLSNSPRIVNLSSRMGVLQNIPNEWARRVIGDDIEKNLLTNKKLGEVLREFLKDYKEGSLKTKNWPIVVSGYTMSKAALNAYTRLLAKKFPHFRINCLCPGFVKTDINQNTGFLSIDEGAECPVKLALLPDNGPSGLFYFMDEVISF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0769 295 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 207 235 IPR020904 GO:0016491
Lan9g0769 295 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 280 IPR036291 -
Lan9g0769 295 Gene3D - 2 295 - -
Lan9g0769 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 IPR002347 -
Lan9g0769 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 IPR002347 -
Lan9g0769 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 220 239 IPR002347 -
Lan9g0769 295 PRINTS Glucose/ribitol dehydrogenase family signature 7 24 IPR002347 -
Lan9g0769 295 PRINTS Glucose/ribitol dehydrogenase family signature 83 94 IPR002347 -
Lan9g0769 295 PRINTS Glucose/ribitol dehydrogenase family signature 220 239 IPR002347 -
Lan9g0769 295 PRINTS Glucose/ribitol dehydrogenase family signature 239 256 IPR002347 -
Lan9g0769 295 PANTHER OXIDOREDUCTASE-RELATED 4 295 - -
Lan9g0769 295 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 4 295 - -
Lan9g0769 295 Pfam short chain dehydrogenase 7 166 IPR002347 -
Lan9g0769 295 Pfam short chain dehydrogenase 207 258 IPR002347 -
Lan9g0769 295 CDD carb_red_PTCR-like_SDR_c 6 295 IPR045313 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0769 Lan-Chr9 12563447 12567475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0769 9 260 Acyl Lipid Metabolism Gene Families AT1G24360 21.961 5.45e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0769 K15095 - gmx:100802560 482.641