Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0758 ATGCTGATTCCATTAGAGCATGTTGATGATGAAAAGGAATCATCAAATAATGACAACGAAGTAGAAGCCACTATTTCTCCACTCATTAGTGGCCTTCCAGATGATATTTCTCTTTTCTGCCTGGCTAGAGTTCCTAGAAAATACCATTCAGTCCTGAAATGTGTCTCAAAAAGATGGAGGGATTTAGTTTGCAGTGAAGAATGGCATTGCTATCGTCAAAAGCATAAACTTGATGAGACCTGGATCTATGCTTTATGCAGGGACAAGTTAGATCAGATTTCCTGTTATGTTTTGGATCCAAACTCATCTAGCAGATGTTGGAAGCTCATGCAAGGGCTTCCACCTCGCATGTTGAGAAGAAAAGGCATGGGTTTCGAAGCTTTGGGAAATAAGCTATTCTTATTGGGTGGCTGTGGCTGGTCTGAAGATGCTACCAATGAGGCCTATTCATACAATGCTTCCATGGATTCTTGGGTTGAAGCTGCTTCCTTGTCAACTGCTAGGTGTTACTTTGCTAGTGAAGTTTTGGACGAAAAACTGTACGCTATTGGTGGAATAGGTTCACATTCAAGTGATCCTCATTCTTGGGATACTTTTGACATTTCTACAAATAGTTGGACATCTCAAACAGATCCTAATATTGTTCCTGAAATTGAAGATTCAGTAGTTCTGGATGGCAAGATATACATCCGATGTGGCAAATCTCCTGCAACTCCCCATGTCTATGCTGTTGTATATGAACCATCAAGTGGCACATGGCAGCACGCAGATGCTGACATGGTTTCAGGATGGAGAGGTCCTGCAGTTGTTGTTGACGGGATCCTTTACGTCTTGGATCAGAGTTCGGGAAGTCGGTTAACGATGTGGCATAAGGAGAGACGTGAATGGATGCCTGTTGGAAAGTTGTCACCATTGCTTACAAGACCACCCTGTCAGCTTGTTGCAATTGGTAAAAGCATTTTTGTTGTTGGCAAAGGGCTTGGCACTGTGGTTGTTGATGTTGGTGATTTGGGAAATGTCGGTCGGGTGATGATGAGTTCTTCTATACCCAAACTGATCTCTGATTACAATGTAATTAGCTGTAAATGCTTGACAATATGA 1101 0.4223 MLIPLEHVDDEKESSNNDNEVEATISPLISGLPDDISLFCLARVPRKYHSVLKCVSKRWRDLVCSEEWHCYRQKHKLDETWIYALCRDKLDQISCYVLDPNSSSRCWKLMQGLPPRMLRRKGMGFEALGNKLFLLGGCGWSEDATNEAYSYNASMDSWVEAASLSTARCYFASEVLDEKLYAIGGIGSHSSDPHSWDTFDISTNSWTSQTDPNIVPEIEDSVVLDGKIYIRCGKSPATPHVYAVVYEPSSGTWQHADADMVSGWRGPAVVVDGILYVLDQSSGSRLTMWHKERREWMPVGKLSPLLTRPPCQLVAIGKSIFVVGKGLGTVVVDVGDLGNVGRVMMSSSIPKLISDYNVISCKCLTI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0758 366 SUPERFAMILY F-box domain 27 77 IPR036047 GO:0005515
Lan9g0758 366 SMART kelc_smart 131 178 IPR006652 GO:0005515
Lan9g0758 366 SMART kelc_smart 179 226 IPR006652 GO:0005515
Lan9g0758 366 Pfam F-box domain 29 70 IPR001810 GO:0005515
Lan9g0758 366 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 15 350 - -
Lan9g0758 366 SUPERFAMILY Kelch motif 92 330 IPR015915 GO:0005515
Lan9g0758 366 Pfam Kelch motif 167 211 IPR006652 GO:0005515
Lan9g0758 366 Pfam Kelch motif 119 165 IPR006652 GO:0005515
Lan9g0758 366 Gene3D - 71 341 IPR015915 GO:0005515
Lan9g0758 366 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 15 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0758 Lan-Chr9 12326918 12331091 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0758 32 307 Miscellaneous Gene Families AT4G33900 27.483 3.32e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0758 - - gmx:100798211 556.984