Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0674 ATGAAGGAAAGTGTGGGAAACCCTTTGCACCTTAAATCTGTGAACCACATCTCTCTTATATGTAGATCAGTTGAAGAATCTATGGACTTCTACCAAAATGTTCTTGGTTTTTTTCCAATTAGGAGGCCTGGTTCTTTTAATTTTGATGGGGCTTGGCTATTTGGGTATGGAATTGGAATTCATTTGTTAGAAGCAGAACACCCAGAGAACTTGCCAGTGAAGAAGGAAATTAATCCAAAAGATAATCACATATCTTTTCAGTGTGAGAGTATGGGAGCAGTAGAAAAAAAGCTGAAAGAGATGGAAATCGATTATGTGAGAGCAACAGTAGAAGAAGGTGGAATCCAAGTGGATCAGCTTTTTTTCCATGACCCAGATGGTTTCATGATTGAGATATGTAACTGTGATAGTCTTCCTGTGATTCCATTAGTTGGTGAAGTTGCAAGAGCATGCTCACGTGTCAATCTTCAGATTATGCAGAATCAGAATCAGATTAAGATGGTTAAGCACTTATGA 516 0.3818 MKESVGNPLHLKSVNHISLICRSVEESMDFYQNVLGFFPIRRPGSFNFDGAWLFGYGIGIHLLEAEHPENLPVKKEINPKDNHISFQCESMGAVEKKLKEMEIDYVRATVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLVGEVARACSRVNLQIMQNQNQIKMVKHL* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0674 171 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 132 IPR004360 -
Lan9g0674 171 CDD VOC_like 14 132 - -
Lan9g0674 171 Gene3D - 7 137 IPR029068 -
Lan9g0674 171 PANTHER - 1 167 - -
Lan9g0674 171 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 7 134 IPR029068 -
Lan9g0674 171 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 135 IPR037523 -
Lan9g0674 171 PANTHER BNAC05G11680D PROTEIN 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0674 Lan-Chr9 9933934 9936638 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0674 - - gmx:100306100 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2068 6 31314107 31315191 Lan9g0674 9 9933934 9936638 PCT
Lan10g0211 10 1327782 1328966 Lan9g0674 9 9933934 9936638 PCT
Lan3g0152 3 987733 989510 Lan9g0674 9 9933934 9936638 PCT
Lan9g0674 9 9933934 9936638 Lan6g2068 6 31314107 31315191 PCT
Lan9g0674 9 9933934 9936638 Lan10g0211 10 1327782 1328966 PCT
Lan9g0674 9 9933934 9936638 Lan3g0152 3 987733 989510 PCT