Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0666 ATGGAGAAGATGAAAATAGAAGAGATTCAATCAACAACCAAGAAGCAACGTATTGCTACTCACACTCACATCAAAGGCCTTGGTCTTCAGGCGAGTGGAAGAGCATTACCATTTGGTGCTGGGTTTGTGGGGCAAGCAGAGGCAAGAGAAGCATCGGGTATTGTGGTCGACATGATAAGACAGAAGAAGATGGCTGGCCGTGCACTCCTTCTCGCTGGGCCCCCTGGAACCGGAAAGACAGCATTAGCACTTGGGATAAGTCAAGAGCTTGGGACCAAGGTTCCGTTCTGCCCAATGGTTGGCTCGGAAGTTTACTCATCCGAAATAAAGAAGACTGAGGTTCTCATGGAAAATTTTCGACGTGCCATTGGTCTACGTATGAAGGAGAATAAGGAAGTTTACGAAGGAGAGGTAACTGAGCTAACTCCAGAAGAAGGTGAGATTGTTACGGGTGGTTACGGTAAAAGTGTAAGCCATGTGGTAATTGGATTGAAAACAGTGAAAGGAACCAAGCAATTGAAGTTGGACCCAACCATATATGATGCCTTGCTTAAGGAAAAGGTAGCTGTTGGGGATGTTATATACATTGAAGCAAATAGTGGAGCTGTGAAACGGGTGGGCCGGAGTGATGTTTTTGCTACAGAGTTTGACCTTGAAGCAGAAGAGTATGTCCCACTTCCAAAGGGAGAAGTTCACAAAAAAAAGGAGATTGTTCAGGATGTAAGTCTTCATGATCTCGATGCTGCCAATGCACAACCTCAAGGTGGGCAAGATATTTTGTCTCTTATGGGTCAGATGATGAAACCCAGGAAAACAGAAATCACTGACAAGCTCAGACAAGAAGTTAACAAGGTTGTGAACCGATATATTGATGAAGGTGTAGCAGAGCTTGTCCCTGGAGTTTTATTTATTGATGAGGTGCATATGCTAGATATGGAGTGTTTTTCCTATCTGAATCGTGCTTTAGAGAGCTCCCTATCTCCGATAGTAATCTTTGCTACAAATAGAGGAATATGCAATGTGAGAGGGACTGATATGACCAGTCCTCATGGCATTCCTGTTGACCTTTTGGATCGGTTGGTGATCATTCGAACACAAACCTACAGTCTTGCTGAAATGATACAGATTCTAGCTATTCGTGCTCAAGTAGAGGAACTGGTTGTCGACGAGGAAAGTTTAGCTTTCCTTGGGGAGATTGGACAACGATCATCTTTAAGGCATGCAGTTCAGCTTTTATCACCAGCTAGCATTGTTGCAAAAATGAGTGGCAGAAACAACATCTGCAAGGCGGATCTTGACGAAGTTAGTTCACTATACTTGGATGCCAAGTCATCAGCCAAGTTACTTCAAGAACAGCAAGAAAAATACATCTCATAA 1377 0.4365 MEKMKIEEIQSTTKKQRIATHTHIKGLGLQASGRALPFGAGFVGQAEAREASGIVVDMIRQKKMAGRALLLAGPPGTGKTALALGISQELGTKVPFCPMVGSEVYSSEIKKTEVLMENFRRAIGLRMKENKEVYEGEVTELTPEEGEIVTGGYGKSVSHVVIGLKTVKGTKQLKLDPTIYDALLKEKVAVGDVIYIEANSGAVKRVGRSDVFATEFDLEAEEYVPLPKGEVHKKKEIVQDVSLHDLDAANAQPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMTSPHGIPVDLLDRLVIIRTQTYSLAEMIQILAIRAQVEELVVDEESLAFLGEIGQRSSLRHAVQLLSPASIVAKMSGRNNICKADLDEVSSLYLDAKSSAKLLQEQQEKYIS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0666 458 Pfam TIP49 AAA-lid domain 376 441 IPR041048 -
Lan9g0666 458 PANTHER RUVB-RELATED REPTIN AND PONTIN 3 458 IPR027238 GO:0008094
Lan9g0666 458 Pfam TIP49 P-loop domain 17 369 IPR010339 GO:0005524
Lan9g0666 458 SMART AAA_5 65 367 IPR003593 -
Lan9g0666 458 Gene3D - 13 365 IPR027417 -
Lan9g0666 458 Gene3D - 368 458 - -
Lan9g0666 458 Gene3D - 122 247 IPR042487 -
Lan9g0666 458 CDD AAA 43 133 - -
Lan9g0666 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 437 IPR027417 -
Lan9g0666 458 PANTHER RUVB-LIKE HELICASE 3 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0666 Lan-Chr9 9822754 9827772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0666 K04499 - gmx:102659805 845.499