LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan9g0622	ATGTCAGAAACAACTCCATCTGAATCATCACCTTCAACCATTCCAATTCAAAATCAAAATCCACAATCATCATCATCAATTTCAATCTCTCAACAACAACAACAACAACAAATTCTGAATCCATCACCTTCCACCTTCGATTATCAACAACAGAAATCAATTCAACAACAACAGAAGCAGCAGCAACAATCACAAACCCTAAATCAGCTACACTCGAATTTTCAATTACAGCAAACCCTACAACGATCCCCTTCAATGTCACGCCTCAATCAACTCCAGAATCAGCAACAACAACAGCAACAACAGCAGCAGCAGCAATTCGGCGCTGTCATGAGGCAACAATCCGGTTTATATAACAATCAGATGAGTTTCAGCGGTTCTAGTTCACCTCAGTTGCAGAATCAGCAGCAGCAGCAGTTGGGAGGATCGAATTTGTCGCGGATCGGGCAAAGTGGACAGTTTCCTATGTTGTCTGCTGCTGGGACACAGTTTAATTTGTTGCCATCGCCAAGGCAGAAGGGTGGACTAGTCCAGGGGTCTCAATTCACTTCGAGTAATTCTGCTGGACAGCCATTGCAAGGAATGCAAGCAATGGGGATGATGGGTTCGCCAAACATCAGTTCGCAGCTAAGAGCCACTGGAGCCCTTGCTTATGCTCAGCAGATGCGGATGAGCCAGGGCCAAATCAGGCAACAGCTATCACAACAAAACTCACTTAACACTCCACAGGTTCAAGGCTTACCAAGGTCGTCATCCCTTGCTTTTATGAATTCCCAGTTATCTGGGTTGTCTCAGAATGGACAGCCTGCAATGATGCATAATTCTTTAACACAGCAACAGTGGTTTAAGCAAATGCCAGCTATGTCTGGCCCTGCCTCACCATTGCGTCTTCAACAACACCAGAGACAGCAGCAGCTGGCGTCGCCTACTCAACTGCAACAAAACTCTATGACCCTGAACCCACAGCAACTATCCCAGCTGATGCAGCAACAGAAACCAATAGGGCAGCCTCAGCTGCATCAGCAACAACAGCCCCAGCAGCAGCAACATATACAACAGCAGCCACAGCAACAATCTCAACTACAGGCAACTGTAAATCAACAGCAACAGCAGCATTCTCCAAGAATTCCAGGACCCACAGGCCAAAAATCAGTTAGTTTTACAGGGTCACAGCCTGATGCCACTGCATCTGGGGCAACCACACCAGGGGGAAGTTCAAGCCAAGGAACTGAAGCAACAAACCAACTCCTTGGGAAGAGAAAGATACAGGATTTAGTTTCACAGGTGGATCCACAGGGTAAGCTGGACCCTGAAGTTATAGATATGCTTTTGGAGCTTGCTGATGACTTCATTGATTCTGCGACCACACACAGTTGCATTTTCGCGAAGCATAGAAAATCATCAACTTTAGAGTCCAAAGATTTATTGCTACACCTAGAGAAAAATTGGGATTTAACAATTCCGGGATATTCAAGTGAAGAGAAGAAGTATCATAAAAAACCTCTATCAAATGACTTACACAAGAAGCGCCTAGATATGGTTCAGACATTGATGGAATCCTCGAATTCCGAGTCAAGTATGAACAACTCCAAAGAGATGAGTAGACAGGGTCTTCATAATCCTGTTGGTGCCCATAACATAGTAAGACCCTTAAGTTCAGAGCAGTTAGTTTCTCACTCAAGTGACTCTCAAATTCTACCTCAGATGACAAGGTTTTAA	1719	0.4479	MSETTPSESSPSTIPIQNQNPQSSSSISISQQQQQQQILNPSPSTFDYQQQKSIQQQQKQQQQSQTLNQLHSNFQLQQTLQRSPSMSRLNQLQNQQQQQQQQQQQQFGAVMRQQSGLYNNQMSFSGSSSPQLQNQQQQQLGGSNLSRIGQSGQFPMLSAAGTQFNLLPSPRQKGGLVQGSQFTSSNSAGQPLQGMQAMGMMGSPNISSQLRATGALAYAQQMRMSQGQIRQQLSQQNSLNTPQVQGLPRSSSLAFMNSQLSGLSQNGQPAMMHNSLTQQQWFKQMPAMSGPASPLRLQQHQRQQQLASPTQLQQNSMTLNPQQLSQLMQQQKPIGQPQLHQQQQPQQQQHIQQQPQQQSQLQATVNQQQQQHSPRIPGPTGQKSVSFTGSQPDATASGATTPGGSSSQGTEATNQLLGKRKIQDLVSQVDPQGKLDPEVIDMLLELADDFIDSATTHSCIFAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKYHKKPLSNDLHKKRLDMVQTLMESSNSESSMNNSKEMSRQGLHNPVGAHNIVRPLSSEQLVSHSSDSQILPQMTRF*	573

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan9g0622	572	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B	6	571	-	-
	Lan9g0622	572	MobiDBLite	consensus disorder prediction	1	67	-	-
	Lan9g0622	572	CDD	TAF12	417	485	IPR003228	GO:0005669\|GO:0006352
	Lan9g0622	572	Pfam	Transcription initiation factor TFIID subunit A	418	485	IPR003228	GO:0005669\|GO:0006352
	Lan9g0622	572	MobiDBLite	consensus disorder prediction	286	312	-	-
	Lan9g0622	572	MobiDBLite	consensus disorder prediction	165	190	-	-
	Lan9g0622	572	MobiDBLite	consensus disorder prediction	294	312	-	-
	Lan9g0622	572	MobiDBLite	consensus disorder prediction	228	247	-	-
	Lan9g0622	572	Coils	Coil	86	106	-	-
	Lan9g0622	572	MobiDBLite	consensus disorder prediction	327	411	-	-
	Lan9g0622	572	Gene3D	Histone, subunit A	412	487	IPR009072	GO:0046982
	Lan9g0622	572	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12	6	571	IPR037794	GO:0000124\|GO:0005669\|GO:0046695
	Lan9g0622	572	MobiDBLite	consensus disorder prediction	84	151	-	-
	Lan9g0622	572	SUPERFAMILY	Histone-fold	415	486	IPR009072	GO:0046982

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan9g0622	Lan-Chr9	9027904	9041287	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan9g0622	K03126		-	gmx:100783017	615.92

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan9g0622	9	9027904	9041287	Lan9g0622	9	9027904	9041287	ECH
	Lan9g0622	9	9027904	9041287	Lan2g0476	2	5415443	5422064	LSH