Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0614 ATGGGGGGAGCCTGTTCAAGGAAGCAAGACAGGGGTAATGAAGATAGTTCTCGTAGGGCACTTTTGCCAAGATTTTCCAAAAGTGGGAGTTTGAGATGGTGGGCATCCTCATTTTCTTGTCCATCGGTAGACATCCAGTTACGAAAGGGAGAATGTCCATCACTGCTGGACTTGTGCATCTTGAAAATAAATCAGGATATTGATAAGTATGATACATTCTCTATGCTGTCACGGGATATAAGTCAGCAAATTTTTAATAAATTGGTATTCTCCCAGCGTCTGACTGATGTTTCCCTTGAGGCATTTCGCGATTGTGCTCTCCAAGATTTTTACTTAGGAGAATATCTCGGTGTCAATGATGCTTGGATGGATGTCATCGCATCTCAGGGTTCATCGTTGCTTTCTTTAGATCTTTCTGGGTCTGATGTCACTGATTTTGGGCTGACTTACCTGAAAGATTGTGAAGGTCTCATGGCTTTAAATCTAAATTACTGTGACCATATTTCAGATCATGGACTGGAGGGCATCAGTGGTCTGTCAAGCTTGACAACTTTGAGTTTTAAAAGAAACGACTCAATATCTGCTCAAGGAATGAGTACCTTTTCTGGTCTTGTTAACTTGGCCAAATTGGATTTGGAGAGATGTCCTGGGATTCATGGAGGTCTTGTTCATCTTCAAGGTTTGACCAAGTTGGAATCTCTCAATTTAAAGTGGTGTAATTGCATAGCAGATGCTGATATGAAGCCTCTATCAGAGCTTGCAAGCTTGAAAAGTCTAGAGATTTCTTGCAGTAAAGTCACTGACTTTGGCATCAGTTTTCTCAAAGGATTGCAAAAGCTTACCCTGTTAAATCTGGAAGGTTGCCTGGTGACCGCTGCATGCTTGGATTATCTTGCAGAGCTTTATGCCCTATCAACCTTGAATCTCAATAGATGTAATCTTTCTGACGTTGGATGTGAAAAGTTTGCAAGACTGGAAAATTTGAAAGTACTAAACTTGGGATTTAATGACATAACGGATGCATGTTTAGCACACTTGAAAGGGTTAACAAAATTGGAGAGCTTGAATCTTGATTCATGTAGGATTCGTGACGAAGGATTGATGAACTTGGCAGGCCATAGGAAATTGAACTGCTTGGAATTGTCTGATACAGAAGTTGGAAACAATGGGTTACACCATATATCAGGATTGTCTAGTCTGGAGAAGATAAACCTATCATTCACAGTGGTTAGTGATAGTGGTTTGAGGAAATTGTGTGGACTCTCATCTCTGAAGTCACTTAATTTGGATGCTCACCAAATTACTGATGCTGGGCTGGCAAACCTTACAAGTTTGACTGGGCTTACTGAGCTGGATCTGTTTGGCGCTCGAATCACAGACTTTGGAACAGACTATTTAAAAAAACTTAAGAACCTGACATCCCTGGAAATATGTGGTGGGGGATTGACTGATGCTGGTGTGAAAAATATCAAAGAGCTTTCTTCTCTAATGTGCTTAAATTTGTCACAAAACTGCAACCTTACGGACAAAACCCTGGAGTTAATTTCTGGGCTTTCTGGGTTGATTTCATTGAATGTCTCAAATTCTCGTATCACACATTCTGGACTGCAACATTTGAAAACTCTCAAGAGTTTGAGGTCTCTGACATTGGAGTCATGTAAGGTTACAGCAAATGACATTAAGAAACTTCAATCAACATATCTCCCAAATTTGGTAAGCTTCAGGCCAGAGTAG 1734 0.4054 MGGACSRKQDRGNEDSSRRALLPRFSKSGSLRWWASSFSCPSVDIQLRKGECPSLLDLCILKINQDIDKYDTFSMLSRDISQQIFNKLVFSQRLTDVSLEAFRDCALQDFYLGEYLGVNDAWMDVIASQGSSLLSLDLSGSDVTDFGLTYLKDCEGLMALNLNYCDHISDHGLEGISGLSSLTTLSFKRNDSISAQGMSTFSGLVNLAKLDLERCPGIHGGLVHLQGLTKLESLNLKWCNCIADADMKPLSELASLKSLEISCSKVTDFGISFLKGLQKLTLLNLEGCLVTAACLDYLAELYALSTLNLNRCNLSDVGCEKFARLENLKVLNLGFNDITDACLAHLKGLTKLESLNLDSCRIRDEGLMNLAGHRKLNCLELSDTEVGNNGLHHISGLSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAHQITDAGLANLTSLTGLTELDLFGARITDFGTDYLKKLKNLTSLEICGGGLTDAGVKNIKELSSLMCLNLSQNCNLTDKTLELISGLSGLISLNVSNSRITHSGLQHLKTLKSLRSLTLESCKVTANDIKKLQSTYLPNLVSFRPE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0614 577 SUPERFAMILY RNI-like 125 438 - -
Lan9g0614 577 Pfam Leucine Rich repeat 229 251 IPR001611 GO:0005515
Lan9g0614 577 Pfam Leucine Rich repeat 398 419 IPR001611 GO:0005515
Lan9g0614 577 Pfam Leucine Rich repeat 180 201 IPR001611 GO:0005515
Lan9g0614 577 Pfam Leucine Rich repeat 422 440 IPR001611 GO:0005515
Lan9g0614 577 PANTHER UNCHARACTERIZED 2 534 - -
Lan9g0614 577 ProSiteProfiles Leucine-rich repeat profile. 327 347 IPR001611 GO:0005515
Lan9g0614 577 Gene3D Ribonuclease Inhibitor 296 392 IPR032675 -
Lan9g0614 577 SUPERFAMILY L domain-like 376 557 - -
Lan9g0614 577 Pfam Leucine rich repeat 304 362 IPR001611 GO:0005515
Lan9g0614 577 SMART LRR_CC_2 397 421 IPR006553 -
Lan9g0614 577 SMART LRR_CC_2 493 518 IPR006553 -
Lan9g0614 577 SMART LRR_CC_2 154 179 IPR006553 -
Lan9g0614 577 SMART LRR_CC_2 542 566 IPR006553 -
Lan9g0614 577 SMART LRR_CC_2 422 445 IPR006553 -
Lan9g0614 577 SMART LRR_CC_2 228 253 IPR006553 -
Lan9g0614 577 SMART LRR_CC_2 301 325 IPR006553 -
Lan9g0614 577 SMART LRR_CC_2 349 373 IPR006553 -
Lan9g0614 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 2 534 - -
Lan9g0614 577 Gene3D Ribonuclease Inhibitor 399 480 IPR032675 -
Lan9g0614 577 Gene3D Ribonuclease Inhibitor 220 295 IPR032675 -
Lan9g0614 577 Gene3D Ribonuclease Inhibitor 87 219 IPR032675 -
Lan9g0614 577 Gene3D Ribonuclease Inhibitor 481 573 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0614 Lan-Chr9 8829194 8844082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0614 255 477 Receptor kinase-like Gene Family AT1G75640 27.354 2.51e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0614 - - gmx:100800666 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0614 9 8829194 8844082 Lan9g0614 9 8829194 8844082 ECH