Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0611 ATGGACTCCAATAATTGGATACCGAACCAAAGCACAGAACCCACTATGGATACAAGTGATTGGAGAGCTCAACTTATGCCTGATTCACGCCAAAGAGTTGTCAACAAAATAATGGATACGTTAAAAAAACATCTTCCTCTTTCTGGTCCAGAGGGATTACTTGAACTTCGGAAGATTGCTCAAAGGTTTGAAGAGAAGATTTTTACTGCTGCAACAAGCCAGCAAGATTATCTACGAAAAATATCTTTGAAGATGCTTACAATGGAGACGAAATCTCAGAATACCATGGGCAACAATATGCCATCAAATCAAGTTGGCCCTAGCAATAAACCTCCTGATCAAGGACTTGTTATGCAGCCTCAAGTTCATAATCCTGGGCAGCAACAACCTGTTCCTTTGCCTAATCAGTCCCAGTCACGTCAACAGATTCTGTCTCAAAATATTCAAAATAACATTGCACCTCAACCTAACCTTCCACCTGTATCTAGTCTACCCCAGACTCCCAGCCAAAATATTGGCCAGAATTCTAACATACAGAGTATAGCTGGGCAGAATTCAGTCGGGAGCACTATGGGCCAGAATTCCAACATGCAGAATATGTTTCCTGGTTCTCAGAGACAAATGCCAGGAAGGCAGCAGGTTCTTTCCCAACAGCAACAGCAGCAATCGCAGAATCAACAACAGTATATTCTCCAACAGCAGCTTTTCAAGCATAAGCTACATCTGCAATCTCAGATGCAGCAGCAGCAACAACAGCAGAACCTTCTACAACCAAATCAGTTGCAATCTTCTCAACAATCAGTTATGCAAACGTCGTCTATTCTGCAACCTTCTATGATGCAAGCATCTTCTCTATCTAGCCTTCAGCATAATCAGCAGGCTAATAATGTTCAACAGTCAACACAGTCGATGCTTCATCAGCATCCCCAAGTTATGAGGCAACAGCCACAACAGACTTCTGCTGTTCATCAGCAACAAACACCAATGAATCAGCAACAAATGTTGCCTGCACAAAAGCAGCAGCAGCAGCTTATGGGGTCACAGTCAAATGCAACAATCATGCAGCATGCTCAGATGCTTGGGGCACAGAACAATGTTGGTGATATACAGCAAACACAGAGGCTGCATTCGCAGCAGAATAATCTTACAAACCTGCAACAGCGGCAACAACAGTTAATGAATCAGCAAAACAACCTAACAAATATGCATCAACAGCAGTTTGGAAATAATGCCCCTGGGTTACAGCAGCAACAGATGCTTGGACCTGAATCTGGCAATCCAGGCATGCAAACAACCCATCACTCTACTCATATGAAGGTCCCCAATCCACAACAATCACAGCAACATGCAACTAATTTGTTACCACCTCAAGCGCAGCAGTCACAGACACAGGGTGCACAGCAGCAATTGATGCCACAGATTAACACTCAGTCTTCACAGTTGCAACAGCAATTTGGTTTGCCGCAGCAGCCAAATTCCTTGCAACGCGATATGCAGCAAAGACATCAAACATCAGTTTCCATGCTTCAACAGCAGAACACAATTGATCAACAAAAGCAGTTGTATCAATCTCAAAGAGCACTGCCAGAAACATCAACAACTTCTGTGGATTCTACAGCACAGACTTCACAATCAAGTGGGGTTGATTGGCAGGAAGAAGTTTACCAAAAGATACAAACCATGAAAGAAAGCTACTTGCCAGAGTTGACAGAAATGTACCAGAGAATTGCTGCTAAACTTCAGCAGCATGAGTCTCTTCCCCAACAACCAAAGTCAGAGCAGCTTGACCGGGCGAGAGCATTTAGAACGATGCTGGAGCATATAATAGCATTCCTAAAGGTTCCCAAGAACAACATTTCATCTAATTTCAAGGAAAAAATTGGGTCTTATGAGAAGCAGATTATAAATCTCATAAACGCAAATAAGCCTAAGAAAGGAATGTCTTCACTACCGGGACAGCCTCCCCCATCTCATATGCACTCCACGTCACAACCACAACCCCAAGTTAGTCAAGTACAGTCTCATGAAAGTCAAATAAACCCTCAGTTGCAGCCAACAAATTTACAAGGTTCTGTAGCAACAATGCAGCAGAATAATATGCCAAACTTACAGCACAACTCTATGTCTGGTGTATCGGCAGCACAGCAGAATATGATGAATTCAATGCAATCTGGTACTAATTTAGATTCTGGACAAGGAAATCCTATGAACTCCCTGCAGCAGGTTCCACTGAGCTCCCTTCAACAAAACCCTATTAGTACTCCTCAACAGACCAACATCAATTCCTTGTCGTCGCAAGGTGGAGTACATGGGATCCAACCAAATCTGAATACCCTTCAGTCAGGTTCCAGTATGCTTCAACACCAGCAACTGAAACATCAGCAAGAGCAGCAGATGCTGCAGAGTCAACAATTAAAACAACATCACCAGAGACAATTGTTGCAGAGGCAGCAGATGCTACAGCAGCAGCAACTACATCAGCCAGGAAAGCAGCAACTGTCTGGCCAACTGCAGACACATCAAATGCCTCAGCTTTACCAAATGAATGATATAAATGATATAAAAGTACGACAAGGAACGGGTGCTAAGCCAGGAGTCTTTCAGCAACATCTTACCTCTGGTCAACACTCAGCTTATCCCCATCAACAGTTAAAACCAGGGGGTCCATATCCTGTTTCTTCACCCCAACTCCTTCAAGCTGCATCTCCTCAGATTCTACAACACTCATCTCCCCAGGTTGACCAACAAAATAATCTCTCATCTTTGACAAAAGTTGCAACTCCTCTGCAGTCTTCAAACTCACCTTTTGTGGGGCCCACTCCTTCACCTCCCTCGGCCCCATCTCCTATGCCAGGAGATTCTGACAAGCCCATTCCTGGTTTTTCGTCAATATCAAATGCTGCAAATATTGGACATCGACAAACAGTGGGAGCAGCAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATATCAGCCTCTCCATTACTGGCTGAGTTCAGTGGGCCTGAAAATGCTTTAGCAGCCACTTCTGGGAGGTCAACTGTTACAGAACAGCCTATTGAAAACTTAATCAGAGTGGTGAAATCAATGTCACATAAAACATTAAGTGCCGCTGTCAGTGATATTGGTTCAGTTGTCAGCATGAATGATCGTATAGCAGGATCAGCTCCTGGTATTGGTTCCAGAGCTGCTGTTGGCGAGGATTTGGCTTCCATGACTAATTGTCGCCTTCAGGCTAGAAATTTCATTACCCAAGATGGTATCAATGGAATTAAGAGGATGAAGCGCAAAACCAGTGCCATACCCTTGAATGTTGTATCATCTGCTGGTAGCCTGAAAGACAGTATCCTAGAGGCTTCTGATCTAGAGTCAACTGCAACATCCAATGTCAAAAGGCCAAAGACTGAGGCTAATCATACACTTTTGGAAGAAGTAAGGGAGATTAATAACCGACTTATTGATACAGTAGTAGAGATAAGCAATGAAGATGTTGTTCCAACTGCAGCAGCCGCTGCTGCTGCTGAAGGAGCAGAAGGGACTATTGTCAAATGTTCATTCAGAGCTGTGGCTCTCAGTCCAACTTTGAAATCCCAATATGCTTCAATGCAGATGTCACCAATTCAACCCCTGCGTTTGCTCGTTCCTGTAAATTATCCTAATTGCTCTCCCATACTCCTAGACAAGTGTCCAGTTGAATCCAGTATGGAGAATGAAGATCTTTCCATGAAGGCAAAGTCAAGGATTAACATATCCCTACGCTCTTTATCACAGCCCATGTCCCTTGGGGAGATAGCTAAGACTTGGGATATTTGTGTTCGCGGCACGATTTCCGAGCATGCACAACAGAGTGGTGGAGGAACCTTCAGCTCCAAGTATGGGACTTGGGATGATTGCTCTGATTGA 3909 0.4403 MDSNNWIPNQSTEPTMDTSDWRAQLMPDSRQRVVNKIMDTLKKHLPLSGPEGLLELRKIAQRFEEKIFTAATSQQDYLRKISLKMLTMETKSQNTMGNNMPSNQVGPSNKPPDQGLVMQPQVHNPGQQQPVPLPNQSQSRQQILSQNIQNNIAPQPNLPPVSSLPQTPSQNIGQNSNIQSIAGQNSVGSTMGQNSNMQNMFPGSQRQMPGRQQVLSQQQQQQSQNQQQYILQQQLFKHKLHLQSQMQQQQQQQNLLQPNQLQSSQQSVMQTSSILQPSMMQASSLSSLQHNQQANNVQQSTQSMLHQHPQVMRQQPQQTSAVHQQQTPMNQQQMLPAQKQQQQLMGSQSNATIMQHAQMLGAQNNVGDIQQTQRLHSQQNNLTNLQQRQQQLMNQQNNLTNMHQQQFGNNAPGLQQQQMLGPESGNPGMQTTHHSTHMKVPNPQQSQQHATNLLPPQAQQSQTQGAQQQLMPQINTQSSQLQQQFGLPQQPNSLQRDMQQRHQTSVSMLQQQNTIDQQKQLYQSQRALPETSTTSVDSTAQTSQSSGVDWQEEVYQKIQTMKESYLPELTEMYQRIAAKLQQHESLPQQPKSEQLDRARAFRTMLEHIIAFLKVPKNNISSNFKEKIGSYEKQIINLINANKPKKGMSSLPGQPPPSHMHSTSQPQPQVSQVQSHESQINPQLQPTNLQGSVATMQQNNMPNLQHNSMSGVSAAQQNMMNSMQSGTNLDSGQGNPMNSLQQVPLSSLQQNPISTPQQTNINSLSSQGGVHGIQPNLNTLQSGSSMLQHQQLKHQQEQQMLQSQQLKQHHQRQLLQRQQMLQQQQLHQPGKQQLSGQLQTHQMPQLYQMNDINDIKVRQGTGAKPGVFQQHLTSGQHSAYPHQQLKPGGPYPVSSPQLLQAASPQILQHSSPQVDQQNNLSSLTKVATPLQSSNSPFVGPTPSPPSAPSPMPGDSDKPIPGFSSISNAANIGHRQTVGAAAPAQSLAIGTPGISASPLLAEFSGPENALAATSGRSTVTEQPIENLIRVVKSMSHKTLSAAVSDIGSVVSMNDRIAGSAPGIGSRAAVGEDLASMTNCRLQARNFITQDGINGIKRMKRKTSAIPLNVVSSAGSLKDSILEASDLESTATSNVKRPKTEANHTLLEEVREINNRLIDTVVEISNEDVVPTAAAAAAAEGAEGTIVKCSFRAVALSPTLKSQYASMQMSPIQPLRLLVPVNYPNCSPILLDKCPVESSMENEDLSMKAKSRINISLRSLSQPMSLGEIAKTWDICVRGTISEHAQQSGGGTFSSKYGTWDDCSD* 1303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0611 1302 Coils Coil 375 405 - -
Lan9g0611 1302 MobiDBLite consensus disorder prediction 654 684 - -
Lan9g0611 1302 MobiDBLite consensus disorder prediction 749 837 - -
Lan9g0611 1302 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 1 1300 IPR044661 GO:0003713|GO:0031490
Lan9g0611 1302 MobiDBLite consensus disorder prediction 929 962 - -
Lan9g0611 1302 SUPERFAMILY Kix domain of CBP (creb binding protein) 18 94 IPR036529 GO:0003712|GO:0006355
Lan9g0611 1302 MobiDBLite consensus disorder prediction 876 895 - -
Lan9g0611 1302 MobiDBLite consensus disorder prediction 93 110 - -
Lan9g0611 1302 MobiDBLite consensus disorder prediction 404 545 - -
Lan9g0611 1302 Gene3D Coactivator CBP, KIX domain 20 98 IPR036529 GO:0003712|GO:0006355
Lan9g0611 1302 MobiDBLite consensus disorder prediction 254 319 - -
Lan9g0611 1302 MobiDBLite consensus disorder prediction 642 684 - -
Lan9g0611 1302 MobiDBLite consensus disorder prediction 93 221 - -
Lan9g0611 1302 Pfam KIX domain 19 98 IPR036546 -
Lan9g0611 1302 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 1 1300 - -
Lan9g0611 1302 MobiDBLite consensus disorder prediction 937 954 - -
Lan9g0611 1302 MobiDBLite consensus disorder prediction 120 157 - -
Lan9g0611 1302 MobiDBLite consensus disorder prediction 164 221 - -
Lan9g0611 1302 Coils Coil 1144 1164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0611 Lan-Chr9 8806272 8815736 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0611 K14972 - gmx:100805336 1622.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0527 5 10776098 10780029 Lan9g0611 9 8806272 8815736 LSH