Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0563 ATGATGATGATGAATATGAGAAGCAGCATCAGTGGTCTGTCTATCTTTAAAATACATTGCTTTTCATCCTCCGACTCAACAACAAGGCGACGCGGTTTTGGAGATAACAACAACACCAACAACAGCAATAACAACAACAACATTCCTATTCCTATTAAGAAGAGGAGCAAGGGATCTACAACTCAACCTCTCCTTCTTGATCTTGACTTTGACCAACGCCTTGAAGCTGTTACTAGGTCTGCACTTGAACAAAAGAAATCACAGCAGCAGCAGCAAAATCAATATGGACCAATTGACTATGATACTCCCATCATCTCTTCTCCTACCAACAACAACAACAAGGAAATTGGCTTTGCTACCAAAATTGGAGTTGGTGTAGCTGTCCTCCTCTTCGGTCTCGTTTTTACTTTAGGAGATTTTATTCCATCACAAAGGTATGCAATTGCATACCCTTCATTTACTTTTGATTCATCATTAAAATTGAGACATGTTTCATGTTTCAGCGTTAGTCCTAATGAAGATAATGCTGTGGTCAAGTTGTCAGAGGAGGATAAAGCTACTCTTCAGAGTAGACTAAAGGAATTTGAAGCAACATTAAGTAACTCCCCAACAGATCCAACTGCTCTTGAAGGGGCTGCAGTAACTCAGGCACAACTAGGGGAATATGCAAAAGCTGCTTCTCTACTTCAAGATCTCACAAAGGAAAAACCAAATGATGCTGATGTTTTTCGTTTACTCGGGGAAGTAAACTATGAACTCAAGGACTATGAAGGGAGTGTTGCAGCATATAAAAGTTCAGCAACGGTGTCTAAAGATATTGAGTTTGAAGTTGTGCGTGGCTTGACCAATTCATTGCTTGCTGCCAAAAAGCCAGACGAGGCAGTTCAATTTCTTTTAGCTTGTCGGGAACGTTTAAGTTCTGAAATCCTGAGCAAAGAACATGATAGCAGCCCAACAGACTCACAGAAGCTGGATCCAATCCAAGTTGAATTACTTCTTGGAAAAGCATACTCAGATTGGGGTCATGTCAGTGATGCTGTAGCTGTTTATGACCAGCTCATATCTACTCATCCTGATGATTTTCGTGGTTATTTAGCTAAGGGAATCATCCTAAAAGAAAACAAAAACATTGGAGATGCAGAGAGAATGTTCATACAAGCTCGGTTCTTTGCACCAGATAAAGCTAAAGCACTTGTGGACCGCTATTCAAGATAA 1215 0.4033 MMMMNMRSSISGLSIFKIHCFSSSDSTTRRRGFGDNNNTNNSNNNNNIPIPIKKRSKGSTTQPLLLDLDFDQRLEAVTRSALEQKKSQQQQQNQYGPIDYDTPIISSPTNNNNKEIGFATKIGVGVAVLLFGLVFTLGDFIPSQRYAIAYPSFTFDSSLKLRHVSCFSVSPNEDNAVVKLSEEDKATLQSRLKEFEATLSNSPTDPTALEGAAVTQAQLGEYAKAASLLQDLTKEKPNDADVFRLLGEVNYELKDYEGSVAAYKSSATVSKDIEFEVVRGLTNSLLAAKKPDEAVQFLLACRERLSSEILSKEHDSSPTDSQKLDPIQVELLLGKAYSDWGHVSDAVAVYDQLISTHPDDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDKAKALVDRYSR* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0563 404 Pfam Tetratricopeptide repeat 192 247 - -
Lan9g0563 404 Gene3D Tetratricopeptide repeat domain 178 402 IPR011990 GO:0005515
Lan9g0563 404 ProSiteProfiles TPR repeat profile. 327 360 IPR019734 GO:0005515
Lan9g0563 404 Coils Coil 178 198 - -
Lan9g0563 404 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 39 404 - -
Lan9g0563 404 SMART tpr_5 361 394 IPR019734 GO:0005515
Lan9g0563 404 SMART tpr_5 206 239 IPR019734 GO:0005515
Lan9g0563 404 SMART tpr_5 327 360 IPR019734 GO:0005515
Lan9g0563 404 SMART tpr_5 240 273 IPR019734 GO:0005515
Lan9g0563 404 MobiDBLite consensus disorder prediction 25 57 - -
Lan9g0563 404 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 39 404 - -
Lan9g0563 404 SUPERFAMILY TPR-like 191 397 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0563 - - lang:109357276 738.799