Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0560 ATGTGGAAGCTGAAGATAGCAGATGGAGGGAAAGACCCATACATATTCAGCACTAACAACTTCGTAGGAAGACAAACATGGGAATATGACCCTGAAGCGGGCACTGCTGAAGAACGAGAAGAGGTTGAAGCAGCTCGTCAACATTTCTATAACAACCGCTTCAACGTCAAACCTTGCGGTGACCTTCTTTGGCGTTTTCAGGTGCTGAGAGAAAACAAGTTCAAACAAACAATAGCTAAAGTGAGGATCGAAGAGGGTGAGGAGATTACATATGAGAAAGCAACAGCCTCATTGAAAAGGGCAGCCCATCACCTATCAGGGTTGCAAACTAGTGATGGACATTGGCCTGCTCAGATTGCTGGGCCCCTCTTTTTCCTTCCACCCTTGGTCTTTTGTATGTACATTACAGGACATCTCGAGTCTGTATTCCCTGAAGAATATCGCAAGGAGATTCTTCGTTATATATATTGTCATCAGAATGAAGATGGTGGGTGGGGACTACACATAGAGGGGCACAGCACTATGTTCGGCACTGCACTCAACTACATATGTATGCGCATTCTTGGAGTAGGACCTAATGAAGGTTTAGACAATGCTTGTGCTAGAGCAAGGAAGTGGATTCATGATCATGGTGGTGTCACACATATACCTTCATGGGGGAAAACTTGGCTTTCGATACTTGGTTTATTTGATTGGTGTGGGAGCAACCCAATGCCCCCAGAATTTTGGATCCTTCCTTCATTCCTTCCTATGCATCCAGCTAAAATGTGGTGTTATTGCCGATTGGTATACATGCCCATGTCTTACTTGTATGGGAAAAGATTTGTGGGCCCAATTACCCCTCTTATCCTAAAATTGAGAGAAGAACTATTTACTGAAGAGTATGAAAAGGTTAATTGGAAAAAGGCGCGTCACCAATGTGCAAAGGAAGACCTTTACTACCCTCATCCTTTGATACAAGATCTAATATGGGATAGTCTATACATATTCACCGAGCCACTTCTTACACGTTGGCCCTTCAACAAATTGGTAAGAGAAAAGGCACTTCAAGTAACAATGATGCATATCCATTACGAAGATGAAACTAGTCGATACTTAACCATTGGATGTGTCGAAAAGGTTTTATGTATGCTTGCTTGTTGGGCGGAAGATCCAAACGGTGATGCTTTCAAGAAGCATCTTGCAAGGGTCCCGGATTACTTATGGGTTTCAGAAGATGGAATGACCATGCAGAGTTTTGGTAGTCAGGAATGGGATGCTGGCTTTGCTGTTCAAGCTTTGCTTGCCACCAATCTAATTGATGAAGTTGGACCTACTCTTCGAAAAGGACATGACTTCATCAAAGAATCACAGGTTAGAGACAACCCTATGGGAGATTTTAAAAGTATGCATCGTCATATTTCTAAAGGGTCATGGACCTTCTCTGATCAAGACCATGGATGGCAAGTTTCTGATTGCACTGCAGAAGGTTTGAAGTGTTGTCTACTTTTATCAATGTTGCCTCCAGAGATTGTGGGGGAAAAGATGAAACCTGAAAGGTTATATGATGCCGTCAATGTCTTATTGTCTCTTCAGAGTAAGAAAGGTGGTTTAGCAGCATGGGAGCCAGCAGGTGCTCAAGAATGGTTGGAACTACTCAATCCCACAGAGTTTTTTGCGGACATTGTAGTTGAGCATGAATATGTTGAATGTACTGGATCGTCAATTGGGGCTCTAGTATTGTTCAAGAAACTATACCCGGGGCACAGGAAGAAAGAAATAGAGAATTTTATTGCGAATGCAGTTCGATTCCTTGAAGATACACAAACACAAGATGGTTCATGGTATGGAAACTGGGGAGTTTGCTTTACTTATGGAACCTGGTTTGCCCTTGTGGGGCTATCCGCTGCTGGAAAAACTTACACCAATTGCGCTGCTATTCGCAAAGCTGTTAAATTTCTACTCACAACACAGAGAGATGATGGTGGATGGGGAGAAAGTTATCTTTCATGCCCAAAAAAGATATATGTACCTCTTGAAGGAAGCCGATCTAATGTTGTACATACCTCATGGGCTTTGATGGGTCTAATTCATGCTGGCCAGGCGGATAGGGATCCAACTCCTCTTCACCGTGCAGCAAAGTTGATAGTCAATTCTCAACTAGAAGATGGTGATTGGCCCCAACAGGAAATCACGGGGGTATTTATGAAGAATTGCATGCTCCATTACCCAATGTATAGAGATATTTATCCAATGTGGGCTCTTGCTGAATATCGTAGGCGGGTTCCATTGCCTTCAGAGCAATAG 2286 0.4309 MWKLKIADGGKDPYIFSTNNFVGRQTWEYDPEAGTAEEREEVEAARQHFYNNRFNVKPCGDLLWRFQVLRENKFKQTIAKVRIEEGEEITYEKATASLKRAAHHLSGLQTSDGHWPAQIAGPLFFLPPLVFCMYITGHLESVFPEEYRKEILRYIYCHQNEDGGWGLHIEGHSTMFGTALNYICMRILGVGPNEGLDNACARARKWIHDHGGVTHIPSWGKTWLSILGLFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILKLREELFTEEYEKVNWKKARHQCAKEDLYYPHPLIQDLIWDSLYIFTEPLLTRWPFNKLVREKALQVTMMHIHYEDETSRYLTIGCVEKVLCMLACWAEDPNGDAFKKHLARVPDYLWVSEDGMTMQSFGSQEWDAGFAVQALLATNLIDEVGPTLRKGHDFIKESQVRDNPMGDFKSMHRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLLSMLPPEIVGEKMKPERLYDAVNVLLSLQSKKGGLAAWEPAGAQEWLELLNPTEFFADIVVEHEYVECTGSSIGALVLFKKLYPGHRKKEIENFIANAVRFLEDTQTQDGSWYGNWGVCFTYGTWFALVGLSAAGKTYTNCAAIRKAVKFLLTTQRDDGGWGESYLSCPKKIYVPLEGSRSNVVHTSWALMGLIHAGQADRDPTPLHRAAKLIVNSQLEDGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPSEQ* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0560 761 Pfam Squalene-hopene cyclase C-terminal domain 418 753 IPR032696 -
Lan9g0560 761 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 756 IPR018333 GO:0005811|GO:0016104|GO:0016866
Lan9g0560 761 TIGRFAM squalene_cyclas: squalene/oxidosqualene cyclases 98 753 IPR018333 GO:0005811|GO:0016104|GO:0016866
Lan9g0560 761 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 351 756 IPR008930 -
Lan9g0560 761 Gene3D - 66 224 - -
Lan9g0560 761 ProSitePatterns Terpene synthases signature. 605 619 IPR002365 GO:0016866
Lan9g0560 761 Gene3D - 388 759 - -
Lan9g0560 761 PANTHER LUPEOL SYNTHASE 1 1 756 - -
Lan9g0560 761 SFLD Prenyltransferase Like 2 27 754 IPR018333 GO:0005811|GO:0016104|GO:0016866
Lan9g0560 761 CDD SQCY_1 98 751 IPR018333 GO:0005811|GO:0016104|GO:0016866
Lan9g0560 761 Pfam Squalene-hopene cyclase N-terminal domain 99 404 IPR032697 -
Lan9g0560 761 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 410 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0560 Lan-Chr9 8287417 8300818 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0560 K15813 - ag:BAA89815 1499.57