Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0534 ATGAGAATCATATCAATAGCCATTATCTTAGCTATGGTAAATTTGGTTAATGGGCAGATTAATACACCATGCACAACCTCTATGATAAGCAGTTTCACTCCATGTGCCAATTACATTACAGGAAGCACCAATAATGGTGCAATACCATCAAATACATGTTGTGACTCATTAACCTCTTTGATCAGCACTAGCATGGATTGTGCTTGCCTTATAATATCAGCCAATGCTCCAATTTTGCCTGGAAATTTCATCAACCAAGCTCTTGTACTATCCCTTGCAAAAGCATGCAACATTGGTGGAGTCAGTGCACAGTGTAAAGCCTCTGGTTCTCCCCTACCAGCTCCAGGCCCTGCTATTCTTGGATCAAATGGCCCAACTATCCCACCCATTGCCAATTTTCCTACAAGCCCACAAGCTTCAAATATGCAATTGGCAGCATCAACACCAACACCAACACCAGTTGAAGAAGCAGAACCACCATCCAACATTCCAGGAATCCAACCACTCTTGACTCCACTCTCTTCAGCTTCTCATCCATCTTATGTTTCCTTCTCACTTTTTGCATTACTACTATTCATGGGACTTGTTCTTTCTGCCACCTATTAA 606 0.4208 MRIISIAIILAMVNLVNGQINTPCTTSMISSFTPCANYITGSTNNGAIPSNTCCDSLTSLISTSMDCACLIISANAPILPGNFINQALVLSLAKACNIGGVSAQCKASGSPLPAPGPAILGSNGPTIPPIANFPTSPQASNMQLAASTPTPTPVEEAEPPSNIPGIQPLLTPLSSASHPSYVSFSLFALLLFMGLVLSATY* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0534 201 Pfam Probable lipid transfer 7 105 IPR016140 -
Lan9g0534 201 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 5 194 IPR043325 -
Lan9g0534 201 Gene3D - 22 105 IPR036312 -
Lan9g0534 201 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 100 IPR036312 -
Lan9g0534 201 MobiDBLite consensus disorder prediction 141 160 - -
Lan9g0534 201 PANTHER CLASSICAL ARABINOGALACTAN PROTEIN 9-LIKE 5 194 - -
Lan9g0534 201 SMART aai_6 24 105 IPR016140 -
Lan9g0534 201 CDD AAI_LTSS 32 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0534 Lan-Chr9 8139580 8140797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0534 1 116 Lipid Metabolism Gene Families AT2G48140 51.261 4.44e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0534 - - gmx:100786841 206.838