Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0533 ATGACGGCAGCTATGTCCCATGCTGATTCTAAAAGAATGTATTCATGGTGGTGGGACAGTCACATAAGCCCCAAGAACTCAAAATGGCTCCAAGAAAATCTCACAGATATGGATGCTAAGGTGAAACAAATGATTAAGCTTATTGAAGAAGACGCAGATTCCTTTGCAAGGAGGGCAGAAATGTATTATAAGAAACGCCCAGAGCTTATGAACTTGGTTGAAGAGTTTTATCGCGCATACCGAGCGTTAGCCGAGAGATATGATCATGCAACTGGAGTGATTCGGCAAGCTCATCATACCATGGCTGAAGCATTTCCTAATCAAGTCCCTCCCGTACTCACAGATGAGTTACTAACCGAGCCGCATACACCAGAAACACAAAAGGATGCTTCTAATCATCTATATGCTATAAAAAGAAATGGAGCTTATACTGATGAACATGATTCTGATATAAGCAGAAAGGGTCTAAAACAGTTCAATGATCTCTTCATATCAGGGGAACCTAGGAGAACAGAAGGGCGTGCTAGAAGAGGGCTCAATTTCCATGAGATGGATGAGATTATGAAAAACAATGGAATCTATGATGATACTAAGTCTCAAGTCTTGTCCGAGTCTGAACGGTTGACTAAAGCCGAGGAAGAAATCTTGGCCTTAAAGATAGCCCTTGAAAGATTAGAAACTGAAAAGGAAACCGGATTGTTTCAATACCAGCAGAGTATGGAGAGATTGTCTAATCTGGAATCAGAAGTGTCTCATGCGAGAGAGAATTCCCAGGGACTTGATGAACGCACAATTAAAGCTGAAACCGAAGTTCAAACCTTGAAGGAAGCCCTTACTAAGTTACAGGCTGAAAAAGAAGCTTGTCTTGTTCAGTATCAGCAGTGCTTGGAGAAACTGTCTAATCTTGAGAAAAATATCTCTTGTGCTCAAAAAGATGTAGGAGAACTTAATAAACGTGCTTCTAGAGCTGAAACAGAAGCCGAATCGTTACATAAAGACCTTTATAGAGTAGAAGCTGAAAAAGAAGCCGCACTTGTTCAATATAACCAATCGTTGGAGAAAGTGTCCAAATTGGAGGAGGGATTAGTACATGCTGAGGAGAAAGCAAGGAGAACCAATGAACAAGCTAATGTAGTTAAAAATGAAATTGAGGCAATGAAGTTAGAAATTACTAAGCTTACTCAAGAGAATGAAGATGCAGTGCTTCGTCATCGGCAATGCTTGGAGATAATTTCTGGTTTGGAACATAAACTCTATTGCGCTGAAGAGGAGGTGCGTAAGCTGAACTGCAAGATAGCTGATGGTGTTGAAAAATTGCAAAGTTCTGAACAGGAGTGTGATCTCTTGGAAACATCAAATCAAACACTGCAATCTGAATTTCAATCTCTGGCACAGAAGATGGGGTCTCAAAGTGAAGAACTTACCGAGAAGAGGAAGGAATTAAGTAGACTTTGGACATGCATACAAGAGGAGCGATTGCGATTCATTGAGGCTGAAACTTCTTTCCAAACTCTTCAGAATTTGCATTCTCAATCACAGGAAGAGCTTAGATCACTTGCTTCTGAGCTTCATAATAAGGCTGAATTTCTGGAGAATATGGAATCATGCAAGAATTCTTTGGAGAAGGAAATACAAAGAGTCAAGAAGGGAAACAAAATTTTAAATGAGCTAAGATTATCTTCGTCTTTGTCTATACAAAATTTCCAGGACGAGATATTAAATCTGAGGGAGACAATAGAGGAACTCGAACACAAGGTTGGACTGCGAATAGATGAAAGAAACACTCTTCAGCAAGAAATTTACTGCCTTGAAGAGGAGCTTAATGATGTTAATAAAAGATATGAATCCATGATGGAGGAGGTTGGGTCAACCGGCTTAGATTCACAGTGCTTTGCCTCGTCTGTGAAGAAATTGCAAGATGAGAACTCAAAGCTTAAGGAGAAATACGAGGTCGAGAAATGTGAGAAAGCAGCTCTTGTGGAAAAATTGGAGATCTTGGAGAGTCTTTCGGAGAAATCGATTTCAGATTTGAATACTGAGCTGAATAGTGTCAATGGGAAGGTGAAGGTATTGGAAGAATCTTGCAAATACTTGCTTGATGAGAAAGCCACCTTGTTTTCACAGCTGAAAACTACAACTGACAAGCTAGAGATGATCTCAGAGAAAAACAGCCTTTTAGAAAATTCACTATTTGATGTAAATTCTAAGCTTGAAGGATTAAGGGTGAAGTCGAAGATATCAGAAGATAATTGCATGTTACTTGACCATGAGAAGTATAGCCTCAACTCTGAGAAAGAAACCTTGGTTTCACAATTAAAAATCACTCGTCAAACACTGAAAGATCTGGAGAAAAAACACTATGAGTTGGAACTAAAGCATTCCGAACTTAAAGCTGAAAAGGAATCTGCACTTCAAAGGGGGGAAGAGCTTCTGGTTTCCTTATATTCTGAGAGAGTAGAGAACTCCAGGATTGTGAAATTCAACGAAGGTTACATTGCTGATAAGGAACTGCAAATTCATGTTCTACAAGAAAATGCAAGGCACCGGAAAAAGGAATATGAGGAGGAACTGGACCGAGCGGTACATACTCAAACGGAAAATTTCATCTTGCAGAAATGTATCCATGATTTGGAGCAAAAGAACTTCTCGATTCTAGTCGACTGTCAGAGACTATTGGAGGCATCCAAAATGTCTGATAGATTGGTATCTGAATTGGAGAATGAAAATGTACAAAAGCAGGTTGATATGAATTCAATGTCTGAGAAAACTAAAATACTAAGGATTGGGCTGCTTCAGGTGTTAAAGACTCTCGGCCTGAATGACGACCATCTCTGTCAAGATATGATTGAAGAAGATCAGGAGCTTCTGAACCATATACATGGCAAACTTCATGAGACGCAGAATCATTTTGTCACAGTTTTCAATGAAAGAGAGAGAGCGATGATTGAGAATTCAGTTTTTGTTACATTCCTTCGGCAGTTGAAATTAAATGCAGAAAATCTTGTGGCAGAAAGAGATTCCCTTGACATGGAGCTAAGGATCCAGTCTAATCAGTTCTTGGCATTGCAAGAAGAGGTCCAAAAGATATTAGAGAAGAATCAGGAATTGAAGTTGGCAATAACCAAAGGAGATGAGAAAATGAAAGTAATGAATACTGAAATTGAGAATCTATGCAAGCAGCTTTCAGACTTGGAAGTGGCTCACAAAAACACACTAGAAGAAAGTTGCAAGACAGTTGAAGAGAAAAATTGCTTGATAAGAAGACTTCTAGATCTAGGTGAAGAGAAAGGAAAGTTGGAAGAAGAAGTCTGCCTCATGATTCATGACATAATTGTTCAATCAAATCTTTCTCTAATCTTGCAGGAAGTTCTATTTGAAAAATTTGTAGCACTTGAGAAGGTAAGCAGTGATCTTGGTAAATTATGTTTCGTAAATACCAACCTTGAGGAAAGATTAAAAATAATGGCGAGCAAATTAGAAGATGGGCAAATGGAAAATTCGCATCTTAAAGAATCATTTGTTGTGTCGAATGTTGAACTCAAGTTACTTGAATCTGTCAATGATCAACTAAATTGTCAGATGACGAATGGAAAGGAGTTGTTGTCTCGAAAGGAGAATGATATACTGAAAGCAGCAGAGATGATTAGTGCTTTACGCGATGAGAAAACAGAATTGCAAAGATTGGTGGAAGATCTAAAGAGTAAGTACGATGAAGCCAGGGTGATACTTGCAGACCAAGCTACTCAAATTTTAAATTTATCCTCAGACAAGGATCGTGAAAATGAAAAGCTCGCATGCCTTTATGAAGTGAACCAAAAGTTAGAGGCTGAAATGCAGCACCTGTGTCAAGAACTTGGAGAAACTAAGCTGAGGGAAGAGAAGCTAAGCAGTGAACTACAAAATGGAGCAAATGAGATTGAACAATTGGAGACTCAAGCTGATATGCTCTATGCTGGTCTGCAGATTTCTGCGGTGAATGAGACATTATTTGAAGGGAAGGCTCGCGAGCTAGACGATGCTTGCAAGAATCTTGAACTCAGAAGCGATGCCAAAGATATGTATAGTGAAATGCTGAAAGAAAGAGTTATGAAATTGGAAGGTGAAAACAGAAGATTACATGGTCAGTTGGCTGCATATGTCCCTGCTGCCAGTGCTTTGAATGATTGTATAACATCCCTGGAGATGCAGATTGTTGTACATGCAAATCCTCATGACTACAAAGAATCAAAGGCTAAAATTTTGGCAAATCCCCAATACACTGAAGGTGGTCCACAAACTAGTGAAAATCAGAATGCTACAGCACCAGATGCTCTTCCAAACTTGCAAGACATGTGGAAAAGGATCAATGCAATTGAAATGGCTGTTAAACAGATGAGTGAAAGTTCCAAACCTAAGGATGAAATGAGAGAGATTCAAGTATTAAAATCTGGGACCAGTCAAACAAATATTCAAGTAAGTAAGCATGTTACTCAAATGGATGAAGCAAAGGTGCATCAAGGTAGACCTTCTGCTGAACTGAAACCAAAAGACATCATGCTTGACCAAATGACAGAATGTTCATCATATGGTATAAGTATGAGAGGAATTCTCGAGTCTGATGATCGGATACTCGAATTGTGGGAAACCGCTGATAAGGACAGAAGTATTGGCCTCAAAGTTGGCAAGATACAAACACAGAAAACAGCTACTGCATATGGTAGCTACCATGTTGAAAAGGAGAAGTTTGGTGTGGATAAACTAGTGATCCCAAGAAGAAGATTGGCAACACAGACACATCATGAGGAAGATGGCAACAAGAGAAAGGTTTTAGAAAGACTTGATTATGATGCACAAAAGTTGACAAACCTTGAAATTACAGTCCAAGATTTGATGACCAAAGTGGAGATTAGTGAGGAGAGCAGCACAATGAGAAAAGGCATTGAGTATGATAGTGTGAAAGATGAGCTTGAGGCTGCTAAGGAGACCATCACAAAGTTGTTTGACACGAACCACAAGTTGATGAGGAAAGTAGAGTCGGTAACAGATTCAGATGAAAATGGAAGCATGAGCAGAAGGAGAATTCTGGAACAGGCTCAGAGAGGGTCTGAGAAAATAAGAAGGCTGCAGTTGGAGGTGCAAAGACTGCAATTTTTGCTTCTGAAATTGAATGATGAAAGAAAAGGCAAAGGAAAAACAATGGTTGATGATCAAAATTCAAGCGTCCTTTTGCGAGATTATCTATATGAAGGGACAAGAGTTAGCTACCAGAAGAGGAAGAAGAAGAAGAAAGGACACTTTTGTGCATGCATGCAACCTCCTACTAAGGGAGATTGA 5313 0.3932 MTAAMSHADSKRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMNLVEEFYRAYRALAERYDHATGVIRQAHHTMAEAFPNQVPPVLTDELLTEPHTPETQKDASNHLYAIKRNGAYTDEHDSDISRKGLKQFNDLFISGEPRRTEGRARRGLNFHEMDEIMKNNGIYDDTKSQVLSESERLTKAEEEILALKIALERLETEKETGLFQYQQSMERLSNLESEVSHARENSQGLDERTIKAETEVQTLKEALTKLQAEKEACLVQYQQCLEKLSNLEKNISCAQKDVGELNKRASRAETEAESLHKDLYRVEAEKEAALVQYNQSLEKVSKLEEGLVHAEEKARRTNEQANVVKNEIEAMKLEITKLTQENEDAVLRHRQCLEIISGLEHKLYCAEEEVRKLNCKIADGVEKLQSSEQECDLLETSNQTLQSEFQSLAQKMGSQSEELTEKRKELSRLWTCIQEERLRFIEAETSFQTLQNLHSQSQEELRSLASELHNKAEFLENMESCKNSLEKEIQRVKKGNKILNELRLSSSLSIQNFQDEILNLRETIEELEHKVGLRIDERNTLQQEIYCLEEELNDVNKRYESMMEEVGSTGLDSQCFASSVKKLQDENSKLKEKYEVEKCEKAALVEKLEILESLSEKSISDLNTELNSVNGKVKVLEESCKYLLDEKATLFSQLKTTTDKLEMISEKNSLLENSLFDVNSKLEGLRVKSKISEDNCMLLDHEKYSLNSEKETLVSQLKITRQTLKDLEKKHYELELKHSELKAEKESALQRGEELLVSLYSERVENSRIVKFNEGYIADKELQIHVLQENARHRKKEYEEELDRAVHTQTENFILQKCIHDLEQKNFSILVDCQRLLEASKMSDRLVSELENENVQKQVDMNSMSEKTKILRIGLLQVLKTLGLNDDHLCQDMIEEDQELLNHIHGKLHETQNHFVTVFNERERAMIENSVFVTFLRQLKLNAENLVAERDSLDMELRIQSNQFLALQEEVQKILEKNQELKLAITKGDEKMKVMNTEIENLCKQLSDLEVAHKNTLEESCKTVEEKNCLIRRLLDLGEEKGKLEEEVCLMIHDIIVQSNLSLILQEVLFEKFVALEKVSSDLGKLCFVNTNLEERLKIMASKLEDGQMENSHLKESFVVSNVELKLLESVNDQLNCQMTNGKELLSRKENDILKAAEMISALRDEKTELQRLVEDLKSKYDEARVILADQATQILNLSSDKDRENEKLACLYEVNQKLEAEMQHLCQELGETKLREEKLSSELQNGANEIEQLETQADMLYAGLQISAVNETLFEGKARELDDACKNLELRSDAKDMYSEMLKERVMKLEGENRRLHGQLAAYVPAASALNDCITSLEMQIVVHANPHDYKESKAKILANPQYTEGGPQTSENQNATAPDALPNLQDMWKRINAIEMAVKQMSESSKPKDEMREIQVLKSGTSQTNIQVSKHVTQMDEAKVHQGRPSAELKPKDIMLDQMTECSSYGISMRGILESDDRILELWETADKDRSIGLKVGKIQTQKTATAYGSYHVEKEKFGVDKLVIPRRRLATQTHHEEDGNKRKVLERLDYDAQKLTNLEITVQDLMTKVEISEESSTMRKGIEYDSVKDELEAAKETITKLFDTNHKLMRKVESVTDSDENGSMSRRRILEQAQRGSEKIRRLQLEVQRLQFLLLKLNDERKGKGKTMVDDQNSSVLLRDYLYEGTRVSYQKRKKKKKGHFCACMQPPTKGD* 1771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0533 1770 Coils Coil 439 459 - -
Lan9g0533 1770 SUPERFAMILY Tropomyosin 397 624 - -
Lan9g0533 1770 Coils Coil 1698 1718 - -
Lan9g0533 1770 Coils Coil 635 662 - -
Lan9g0533 1770 Coils Coil 902 922 - -
Lan9g0533 1770 Coils Coil 348 403 - -
Lan9g0533 1770 Coils Coil 1642 1662 - -
Lan9g0533 1770 Coils Coil 1019 1039 - -
Lan9g0533 1770 Coils Coil 843 863 - -
Lan9g0533 1770 Coils Coil 502 557 - -
Lan9g0533 1770 Coils Coil 194 228 - -
Lan9g0533 1770 Coils Coil 236 340 - -
Lan9g0533 1770 Coils Coil 765 799 - -
Lan9g0533 1770 Coils Coil 593 620 - -
Lan9g0533 1770 PANTHER PROTEIN NETWORKED 4A 3 1770 - -
Lan9g0533 1770 Coils Coil 1355 1375 - -
Lan9g0533 1770 Coils Coil 1047 1074 - -
Lan9g0533 1770 Coils Coil 674 694 - -
Lan9g0533 1770 Coils Coil 411 431 - -
Lan9g0533 1770 Coils Coil 1257 1312 - -
Lan9g0533 1770 Gene3D - 288 486 - -
Lan9g0533 1770 Coils Coil 991 1011 - -
Lan9g0533 1770 Coils Coil 565 585 - -
Lan9g0533 1770 Pfam KIP1-like protein 15 88 IPR011684 GO:0003779
Lan9g0533 1770 Coils Coil 1082 1102 - -
Lan9g0533 1770 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 14 94 IPR011684 GO:0003779
Lan9g0533 1770 Coils Coil 1145 1165 - -
Lan9g0533 1770 Coils Coil 464 484 - -
Lan9g0533 1770 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 3 1770 - -
Lan9g0533 1770 Coils Coil 1201 1242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0533 Lan-Chr9 8131497 8138680 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0533 - - gmx:100810726 2350.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0533 9 8131497 8138680 Lan8g0695 8 9057679 9066248 PCT
Lan9g0533 9 8131497 8138680 Lan20g0182 20 1190656 1204024 PCT
Lan9g0533 9 8131497 8138680 Lan4g1725 4 25910074 25920019 PCT
Lan8g0695 8 9057679 9066248 Lan9g0533 9 8131497 8138680 PCT
Lan20g0182 20 1190656 1204024 Lan9g0533 9 8131497 8138680 PCT
Lan4g1725 4 25910074 25920019 Lan9g0533 9 8131497 8138680 PCT