Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0518 ATGCATTATTATAATTCAATGAAGATTCAGCCGATAGATTCTAAAGCGGAGGAGGAGATGAGTGTGGAGGTGGTGAAGCCGGTGGCGAGGTCGAGGATAAAGCGTCTCTTTGAGAGGCAATTTTCCGTTCTGAAATATTCAGCCGCCGCCGATAAGATCACCGCTGCCGGAGATGGCGTCGATAAAGGATCCGGTGATTTTGAACCGAGCTCGGTGTGTTTGGCAAAAATGGTGCAGAATTTCATGGAAGGAGGGAATCATGATAAACACTCTGTTTCTAGTAACTGCTTCAATGGAAACTGTGATTATGGTTCCGATGCTGAATCAGAAACTTATTCTTCTTCCACTGAAGCACTCAAGGGTTTGGTGGCATGTGCGAGTGTTTGTGAGAGGAATTTGCTTGCGGATACTGCAAAGATAGTTGAGAAGAACAAGGTGATGTGTAAGAGAAAAGATCAAGTTTGCAGAAACGTTGTGACTGAAGGTTTAATTGCATTTGGATATGATGCTTCTGTCTGCAAATCTCGCTGGGAAAAATCCCCTTATTATCCTTCTGGGGAATATGAATACATCGATGTGATGATTGGAAAAGAGAGGGTACTAATTGACATTGACTTCAGAGCAGAATTTGAGATTGCTAGATCAACCAAGGCATACAAGGCCATCCTTCAAAGTCTCCCTTACATATTTGTTGGCAAGTGTGATAGGTTGCAGAGCATTGTAGCCATTGCATCTGAAGCAGCAAAGCAGAGTTTGAAGAAAAAAGGCATGCCTGTTCCTCCGTGGAGAAAACTTGGATATGTCAAAGCAAAATGGCTCTCCACTTATATAAGAACCACAATTACACCCACCTTCCTTGATCCACAAACAAACAAAGAGGAAACGAAAAAACAGCATCAGCTGAACAAATCGGTGTTAACTTCCGGTGTAGAGGATAAGGCGAAGATGGTGGTGGTTCATTGGAAGTTGCCGGAGGCGAAGCCGAAGAGCATACAATCTGGTTTGGCTGCTTTCTTTGCTGAAAAATCATAG 1032 0.4331 MHYYNSMKIQPIDSKAEEEMSVEVVKPVARSRIKRLFERQFSVLKYSAAADKITAAGDGVDKGSGDFEPSSVCLAKMVQNFMEGGNHDKHSVSSNCFNGNCDYGSDAESETYSSSTEALKGLVACASVCERNLLADTAKIVEKNKVMCKRKDQVCRNVVTEGLIAFGYDASVCKSRWEKSPYYPSGEYEYIDVMIGKERVLIDIDFRAEFEIARSTKAYKAILQSLPYIFVGKCDRLQSIVAIASEAAKQSLKKKGMPVPPWRKLGYVKAKWLSTYIRTTITPTFLDPQTNKEETKKQHQLNKSVLTSGVEDKAKMVVVHWKLPEAKPKSIQSGLAAFFAEKS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0518 343 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 157 279 IPR006502 -
Lan9g0518 343 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 27 336 - -
Lan9g0518 343 Pfam PDDEXK-like family of unknown function 76 278 IPR006502 -
Lan9g0518 343 PANTHER OS03G0796600 PROTEIN 27 336 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0518 Lan-Chr9 7996889 7999995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0518 - - gmx:100782749 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0518 9 7996889 7999995 Lan4g1736 4 26042200 26044346 LSH
Lan9g0518 9 7996889 7999995 Lan9g0518 9 7996889 7999995 PCT
Lan9g0518 9 7996889 7999995 Lan4g1736 4 26042200 26044346 PCT
Lan4g1736 4 26042200 26044346 Lan9g0518 9 7996889 7999995 PCT