Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0504 ATGGCGAATCTTCAGAATCAAAAGCCATGGAAAGCAGAATATGCAAAATCAGGAAGATCATCATGTAGAACTTGCAAGTCACCCATTGCTTCAGAGGATCTTCGTCTTGGAAAAATGGTTCAATCCACCAAATTCGATGGCCTCATGCCCATGTGGAATCATGCTACTTGCATATTGAAGAAAGCCAACCAGATAAAAGAAACTGATGATGTTGAAAACTTGGAGTTGCTTCGTTGGGAAGATCAGCAGAAGATCAGAAAATACATAGAGGATGGTGGCGGCAGTAGTGCTCCGTCAAAATCAAAAGCCACCAAAGATGGTGGTAGTGCTCCACCAAAACCAGATGCCACCAAAAATGCTGAATGTGGTATTGAAGTTTCTCAAACTTCTCGTGCCACTTGCCGGGATTGTGGCCAAAAAATTATGAAAGGAGAGGTTCGCATATCTATTAAGCCTGATGGTCAAGGTGCTAGAGGCTTAGCTTGGCATCATGCCAAGTGTCTCATGGAATTATCACCATCAATTCAAGTAGATAAGTTGTCTGGATGGATTAGTCTCTCTCCTTCCGAACAATCATCTGTCAGTGATTTGGCTAAGAACGGAGGTACTAGTGCTACAAACGTTGAGGCCGAAGAGGTTAAAGAATCCACTTCCAAAGGTGGCACGAAACGTGGGAAGGACGCTGATGGTGGACAGAAATCAAAAGTTGCTAAGGCCGAGGGAGATGTGGCGGCGAGCAGGACAGCGTCAGCAAAAAATGCTAAAGCTTCGGAGGAGGCACGTGATTTGGAGAGTAGACTGGAGACCCAGAGCATAGAACTCTGGGCTCTGAAGGACAATCTTAAAAAGCATGTGACAAATGCAGAGATGCGTGAAATGCTCGAAGCCAATGGTCAAGACTCAAGCGGATCAGAACTGGATTTGCGTGATCGCTGTGCTGATGGAATGATGTTTGGAGGACTTGGTCATTGCCCAATATGTGCTGATTTTCTGCGTTACTCCGGAGGAATGTACCGGTGCACCGGATTCAGTTCTGAGTGGAGTAAGTGTTCCTACTCTACCAGTGAACCAAAACGTCTCGAAGGGAAGTGGAAAATCCCTGTGGAAACAACAAACGAGTTTCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAAACCAGTTCGGGTATTGCCTCTTCAATCACCAAAGAAGCCCGTGGATGGTCAAACTAGTGCTTCCCAGCACAAATCATCAAATAGTGAAAGTTTGAGGGATTTAAAAATTTCTATTTGTGGATTACCGAAAGACTCTATTGTGGAATGGAAACGCAAAATTGATGACATAGGTGCGGTGTTTCATGCAAAAGTTAAGAAAGATACTAACTGCTTGGTGGTCAGTGGAACACTCAATGATGAAGCTGAGATGCGAAAAGCAAGGAGGATGAAAATACCGATAGTTCGAGAGGACTATTTGGTTGACTGTATAGAAAAAAAGAAGAAGCTTCCATTCGACATGTACAAAGTTGAAATGATTGGTGAGTCTTCTAGCATGGTCACCATCAAAGTGAAGGGACAAAGTGCTGTTCATGATGCTTCTGGACTAGCCGATTCCGGCCACATACTAGAGGAAGGGAAAAGCATATATAATACAACGTTGAATATGTCTGATTTATCTACTGGTGTTAATAGTTACTACGTTCTCCAAATTATCGAAGAAGATAAGGGGTCAGATTGCTATGTGTTTCGTAAATGGGGTCGAGTGGGAAATGACAAGATTGGAGGAAGCAAACTGGACGGAATGCCGAAATCAGATGCAATCCATGAATTCAAACGGTTATTCTTTGAGAAAACTGCAAACCCTTGGGAGGCTTGGGAACAAAAGACTATTCAGAAGCAACCTGGAAGATTCTTCCCATTAGATATTGATTATGGGGTTAACAAGCAAGTCTCGAAGAAAAAGAGTAACAATGAAGACAGCAAGCTAGCCCCACCGTTAATTGAGTTGATGAAAATGCTCTTCAATGTAGAAACATACAGAGCTGCCATGATGGAATTTGAGATCAATATGTCAGAAATGCCACTCGGGAAACTTAGCAAAAGTAACATCCAAAAGGGGTTTGAAGCATTAACAGATATACAGAATCTGTTAAAAACTGACAATCCTGATCCGTCAATGTTGGAAAGCTTGCTTATTGATGCCAGCAATCGGTTCTTCACAATGATCCCTTCTATTCATCCACATATTATTAGGGATGAGGATGATTTCAAGTCAAAGGTGAAAATGTTAGAAGCCCTTCAAGACATCGAAATAGCTTCAAGATTAGTTGGATTTGATGCCAATAACGATGACTCAATTGACGATAATTATAAGAAGCTCAACTGTGATATATCTCCACTTCCTCATGACAGTGAAGATTATCGTTTAATAGAGAAGTTTCTCCATAATACTCATGCCCCTACACATACAGAATGGAGTCTTGAGTTGGAAGAAGTTTTTGCACTCGAAAGGGAAGGGGAATTTGACATGTTTGTTCCTTACAGGGAGAAACTTGGTAACAGAATGCTCCTATGGCACGGTTCTAGGATGACAAATTTTGTGGGCATCCTTAGCCAAGGACTCAGAATTGCACCTCCCGAAGCCCCAGCTACTGGCTACATGTTTGGTAAAGGGGTTTACTTTGCTGATCTGGTGAGCAAGAGTGCTCAGTATTGCTTCACTGATAAGAAAAATCCTGTTGGCCTAATGCTTTTGAGTGAAGTCGCCCTCGGAAATGTCTATGAGCTCAACAAAGCTAAGTACATGGATAAACCTCCCCGTGGAAAACACTCGACTAAAGGACTGGGCAAAAAAGTGCCTAATGAATCGGAATATGCAAAGTGGAAGGGTGATGTCACTGTTCCTTGCGGCAAACCAGTGCCATCAAGTGTCAAGGCTTCGGAGCTCATGTACAACGAGTACATTGTTTATAATACCGCACAAGTTAAGATGCAATTTTTGTTGAAGGTGAGGTTCCATCACAAGAGATGA 3009 0.4247 MANLQNQKPWKAEYAKSGRSSCRTCKSPIASEDLRLGKMVQSTKFDGLMPMWNHATCILKKANQIKETDDVENLELLRWEDQQKIRKYIEDGGGSSAPSKSKATKDGGSAPPKPDATKNAECGIEVSQTSRATCRDCGQKIMKGEVRISIKPDGQGARGLAWHHAKCLMELSPSIQVDKLSGWISLSPSEQSSVSDLAKNGGTSATNVEAEEVKESTSKGGTKRGKDADGGQKSKVAKAEGDVAASRTASAKNAKASEEARDLESRLETQSIELWALKDNLKKHVTNAEMREMLEANGQDSSGSELDLRDRCADGMMFGGLGHCPICADFLRYSGGMYRCTGFSSEWSKCSYSTSEPKRLEGKWKIPVETTNEFLKKWFKSQKGKKPVRVLPLQSPKKPVDGQTSASQHKSSNSESLRDLKISICGLPKDSIVEWKRKIDDIGAVFHAKVKKDTNCLVVSGTLNDEAEMRKARRMKIPIVREDYLVDCIEKKKKLPFDMYKVEMIGESSSMVTIKVKGQSAVHDASGLADSGHILEEGKSIYNTTLNMSDLSTGVNSYYVLQIIEEDKGSDCYVFRKWGRVGNDKIGGSKLDGMPKSDAIHEFKRLFFEKTANPWEAWEQKTIQKQPGRFFPLDIDYGVNKQVSKKKSNNEDSKLAPPLIELMKMLFNVETYRAAMMEFEINMSEMPLGKLSKSNIQKGFEALTDIQNLLKTDNPDPSMLESLLIDASNRFFTMIPSIHPHIIRDEDDFKSKVKMLEALQDIEIASRLVGFDANNDDSIDDNYKKLNCDISPLPHDSEDYRLIEKFLHNTHAPTHTEWSLELEEVFALEREGEFDMFVPYREKLGNRMLLWHGSRMTNFVGILSQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFTDKKNPVGLMLLSEVALGNVYELNKAKYMDKPPRGKHSTKGLGKKVPNESEYAKWKGDVTVPCGKPVPSSVKASELMYNEYIVYNTAQVKMQFLLKVRFHHKR* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0504 1002 Pfam Poly(ADP-ribose) polymerase catalytic domain 797 998 IPR012317 GO:0003950
Lan9g0504 1002 Gene3D - 787 1002 - -
Lan9g0504 1002 Gene3D - 2 111 IPR036957 GO:0003677|GO:0008270
Lan9g0504 1002 Gene3D - 114 221 IPR036957 GO:0003677|GO:0008270
Lan9g0504 1002 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 122 205 - -
Lan9g0504 1002 MobiDBLite consensus disorder prediction 398 414 - -
Lan9g0504 1002 Pfam PADR1 (NUC008) domain 310 359 IPR012982 -
Lan9g0504 1002 Gene3D - 246 319 - -
Lan9g0504 1002 SUPERFAMILY WGR domain-like 509 635 IPR036930 -
Lan9g0504 1002 MobiDBLite consensus disorder prediction 386 414 - -
Lan9g0504 1002 SMART WGR_cls 542 625 IPR008893 -
Lan9g0504 1002 SUPERFAMILY BRCT domain 414 502 IPR036420 -
Lan9g0504 1002 Gene3D - 320 380 IPR038650 -
Lan9g0504 1002 Pfam WGR domain 542 620 IPR008893 -
Lan9g0504 1002 ProSiteProfiles BRCT domain profile. 412 502 IPR001357 -
Lan9g0504 1002 Pfam BRCA1 C Terminus (BRCT) domain 416 489 IPR001357 -
Lan9g0504 1002 MobiDBLite consensus disorder prediction 89 119 - -
Lan9g0504 1002 MobiDBLite consensus disorder prediction 189 263 - -
Lan9g0504 1002 Gene3D BRCT domain 407 510 IPR036420 -
Lan9g0504 1002 ProSiteProfiles PARP alpha-helical domain profile. 652 770 IPR004102 GO:0003950
Lan9g0504 1002 CDD parp_like 653 997 - -
Lan9g0504 1002 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 50 996 - -
Lan9g0504 1002 SMART zf_PARP_3 125 199 IPR001510 GO:0003677|GO:0008270
Lan9g0504 1002 SMART zf_PARP_3 13 90 IPR001510 GO:0003677|GO:0008270
Lan9g0504 1002 PANTHER DNA LIGASE 50 996 - -
Lan9g0504 1002 SUPERFAMILY ADP-ribosylation 786 1001 - -
Lan9g0504 1002 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 125 196 IPR001510 GO:0003677|GO:0008270
Lan9g0504 1002 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 13 89 IPR001510 GO:0003677|GO:0008270
Lan9g0504 1002 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 122 202 IPR001510 GO:0003677|GO:0008270
Lan9g0504 1002 SMART PADR1_2 308 361 IPR012982 -
Lan9g0504 1002 ProSiteProfiles WGR domain profile. 531 630 IPR008893 -
Lan9g0504 1002 Gene3D - 642 786 IPR036616 GO:0003950
Lan9g0504 1002 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 653 787 IPR036616 GO:0003950
Lan9g0504 1002 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 10 93 IPR001510 GO:0003677|GO:0008270
Lan9g0504 1002 SMART BRCT_7 414 492 IPR001357 -
Lan9g0504 1002 Pfam Poly(ADP-ribose) polymerase, regulatory domain 653 783 IPR004102 GO:0003950
Lan9g0504 1002 CDD WGR_PARP1_like 532 637 - -
Lan9g0504 1002 MobiDBLite consensus disorder prediction 212 236 - -
Lan9g0504 1002 MobiDBLite consensus disorder prediction 189 211 - -
Lan9g0504 1002 ProSiteProfiles PARP catalytic domain profile. 777 1002 IPR012317 GO:0003950
Lan9g0504 1002 Coils Coil 246 280 - -
Lan9g0504 1002 PIRSF NAD_ADPRT 3 1002 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Lan9g0504 1002 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0504 Lan-Chr9 7841075 7848899 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0504 K24070 - gmx:100815900 1668.29