Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0488 ATGGGTTCTCTTTCTCCTCCTTCATTCTCTAACACTATCTCTTCATCCAAACACACCCTTAATTCTAACCACATTGACGAAACTACCCTCATCAACCTCTTCAAATCTCAGCAAAACCACCTCAACTTCTTCTTCAACAACATCGACCACTCCCAAACCCTCTCCTTCACGCGCCTCCTCCTCTCCACCGCCGGCACCATCTTCTTCTCCGGCGTCGGAAAATCCGGCTTCGTCGCTCGCAAGATCTCCCAAACGCTCGTCTCCCTCGCCATCCGCTCCGTCTTCCTATCCCCCGTCGACGCGCTACACGGCGACATCGGAATCGTCTCCGCCGGCGACGTCGTCGTACTCCTCAGCAAGTCCGGCGCCACCGATGAGCTTCTCCGGCTTGTACCATGCGCTAGGGCCAAGGGAGCGGAGCTAGTTGCGGTGGTTTCCGTTGAGGGATCGGCGTTGTCGGCGATGTGCGATATGACGGTGGTTTTGCCGCTGGAGAGGGAATTGTGTCCGTTTAATTTGGCGCCGGTGACGTCGACGGCGATTCAGATGGTGTTTGGGGACACGGTGGCGATAGCGTTGATGGGAGCGAGGAATCTGAGCAAGGAAGAGTATGCAGGGAATCATCCAGCTGGAAAAATCGGAAAGAGTCTTATCTTTAAGGTAAAGGATGTCATGAAGAAGGAGGATGAGCTTCCCATTTGCAGGGAATCAGATTTGATTATGGATCAACTCATGGAGCTGACGAGTAAAGGATGTGGATGCCTGCTTGTTGTAGATGACAATCACCATCTGATTGGAACATTTACAGATGGTGATCTACGTCGTACTCTCAAAGCGAGTGGAGATGCCATTTTCAAACTCACCGTGGGCGAAATGTGCAACAGGAAGCCAAGAATTATTGGTCCAGATGCTATGGCAGTGGAAGCAATGAAGAAGATGGAAGCACCTCCATCACCTGTACAGTTTTTGCCTGTGATAAATGATGACTGCACCTTGATTGGAATTGTCACATTGCATGGTTTGGTTTCAGCTGGATTATGA 1041 0.5091 MGSLSPPSFSNTISSSKHTLNSNHIDETTLINLFKSQQNHLNFFFNNIDHSQTLSFTRLLLSTAGTIFFSGVGKSGFVARKISQTLVSLAIRSVFLSPVDALHGDIGIVSAGDVVVLLSKSGATDELLRLVPCARAKGAELVAVVSVEGSALSAMCDMTVVLPLERELCPFNLAPVTSTAIQMVFGDTVAIALMGARNLSKEEYAGNHPAGKIGKSLIFKVKDVMKKEDELPICRESDLIMDQLMELTSKGCGCLLVVDDNHHLIGTFTDGDLRRTLKASGDAIFKLTVGEMCNRKPRIIGPDAMAVEAMKKMEAPPSPVQFLPVINDDCTLIGIVTLHGLVSAGL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0488 346 PIRSF KdsD_KpsF 13 346 IPR004800 GO:0005975|GO:0016853
Lan9g0488 346 Gene3D - 26 215 - -
Lan9g0488 346 Gene3D - 216 344 IPR046342 -
Lan9g0488 346 TIGRFAM kpsF: sugar isomerase, KpsF/GutQ family 65 336 IPR004800 GO:0005975|GO:0016853
Lan9g0488 346 ProSiteProfiles CBS domain profile. 225 284 IPR000644 -
Lan9g0488 346 ProSiteProfiles SIS domain profile. 57 199 IPR001347 GO:0097367|GO:1901135
Lan9g0488 346 CDD CBS_pair_SIS_assoc 217 342 - -
Lan9g0488 346 Pfam SIS domain 61 191 IPR001347 GO:0097367|GO:1901135
Lan9g0488 346 Pfam CBS domain 289 344 IPR000644 -
Lan9g0488 346 Pfam CBS domain 221 278 IPR000644 -
Lan9g0488 346 ProSiteProfiles CBS domain profile. 293 346 IPR000644 -
Lan9g0488 346 CDD SIS_Kpsf 65 192 IPR035474 -
Lan9g0488 346 PANTHER - 15 346 - -
Lan9g0488 346 SUPERFAMILY SIS domain 31 345 IPR046348 GO:0097367|GO:1901135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0488 K06041 - gmx:100805755 541.576