Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0476 ATGGGAGATAGTGAAACAGTAGTTGCTGAAGCATCTGCAGCTGAGGTGTATGCTTCAGCTGGACATGCTGACACAGTCATGAACCCAGTTTTGGAGGCAGGTCAGACCGTTACTGATTCAGCTGGAGAAGGTGCCGAGGGAAATTCAACGTATGGGTTTGGTTATTCTAATGCTGGTGATGGGAATGCATATGCTGGGGATCCTAATTCTGTTCTACAAGCACAATTCAATGCAGCAGATGATAATAAGCAAGCTGTTGGTGCGATTGGTACTGATGAAGCCTCTGGTAGGCTCGGAAACGCAGCTACAGAGACCCCTGTTCAAGTTTCTGAGAATGGCAGTGTTGTTGGTGCAGTGGAAAATGCTACAGGACATGAAAATGGGAATGCGGTGGAGAATATTGGTAGGTCCGGTGATGAAAAACAGCTTGCAGATGGTTATGCTGTCATGTCTGCTGAAGAAGATCGTCTGTGGAACATTGTAAGAGCTAATTCATTAGATTTTACTTCTTGGACGGCTTTGATTGAAGAAACAGAGAAGGTTGCAGAGGACAACATTTTGAAGATTAGAAGAGTTTATGATGCTTTTCTAGAAGAATTTCCTTTGTGCTATGGTTATTGGAAGAAATATGCTGACCATGAGGCACGTGTTGGCTCCGTTGATAAAGTTGTTGAAGTTTATGAGCGTGCTGTTCAAGGTGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACTTATGGGGATCCGGAAACAGTTCGTAGGCTTTTTGAAAGAGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCTCTTTGGGATAAATACATTGAATACGAGTACATGCAGCAAGACTGGGGTCGCCTTGCCCTGATCTACACCAGGATATTAGAGAATCCTAATCAGCAATTGGATCGTTATTTAAGCAGCTTCAAGGAGTTAGCCGGAAATCGACCATTATCAGAATTACGGATTGCTGATGAGGCTTCTGCGGTGGTGGGTGCTGCCTCAGAGACAGCTGGCCAGACTATTGAGGGCGAAGTCCGTCCTGATGGTGCAGAGAGTTCTCCTAAACCTGTAAGTGCTGGCTTAACAGAAGCAGAAGAGTTGGAGAAGTATATTGTAATTAGAGAAGAGATGTATAAGAAAGCTAAGGAGTTCGATTCTAAGATCATTGGTTTTGAAGCAGCTATCCGGAGGCCCTACTTTCATGTACGGTCCCTTAATGTTGGAGAGCTTGAGAATTGGCATAATTATTTGGATTTTATAGAAAGGGAAGGCGACTTAAGCAAGATTGTCAAGTTGTATGAGAGATGTGTCATTGCATGTGCCAATTATCCCGAGTACTGGATACGCTATGTTTTGTGTATGGAGGCCAATAAAAGTATGGATCTTGCAAATAATGTTCTTGCCCGGGCAACCCATGTCTTTGTCAAGAGACAACCTGAGATACATCTCTTTAGTGCTCGATTCAAGGAAGAGAATGAAGATATAACTGGTGCTAGAGCTGCCTATCAACTTGTGCATGATGAAATTTCTCCTGGTCTTCTTGAAGCAATAATCAGACATGCTAATATGGAATATCGACTGGGAAAGTTGGAGGATGCCTTCTCCCTATATGAACAGGCCATTGCCATTGAGAAAGGAAAAGAACATTCACAAACATTGCCATTGTTGTTTGCTCAGTATTCTCGATTTGTTTTTCTGGCTTCTGGTAATGCAGAAAAGGCAAGGCAGATTCTAGTTGAAGGGCTTGAGAATGTTTTGACGTCAAAGCCACTTATTGAGGCTTTATTGCATTTTGAGGCTATTCAACCCTGGCCAAAACAAGTTGATATTGACTTTCTAGACTCGTTGGTTGTCAAATTCATAATGCCCAATGCTGAGAGCCCTAATGTAGCAAGTGCGGCCGAGCGTGAGGAACTTTCAAGCATTTATCTGGAGTTTTTAAATCTCTTTGGAGATGTTCAGTCTATCAAGAAGAGTGAGAATAGGCATGCCAAACTGTTCTTTCCACATAGGAGCATGTCAGAGTTGAGAAAACGTCATGCAGATGATCTATTAACTTCAGATAAAACAAAAGTAGCAAGAACTTATTCTGTTCCATCACCCGCACAACCTGTGGTTGGTACATATCCAACTGCCCAGAATCAGTGGACTAATTATGGAGTTCAACCTCAAGCTTGGCCTCCGGCGACTCAAGCACAAGGACAACAATGGACTGCTGGCTACACCCAGCAGGCTTCATATGGGGCTTATGCAGGTTATGGGGGCAACTATGCAAACCCACAGTTGCCTGCACCAGTTCCTCAAAGTGTTCCATATGCCGGTGCCTACCCTCCTGCATATCCTGTACAGGTACGGAGTAGTTTCAGCCCTTCAGTTTTCTCAACAAACAACAAGTTGGAGACTCAAAGGTTGCATCTATAG 2448 0.4322 MGDSETVVAEASAAEVYASAGHADTVMNPVLEAGQTVTDSAGEGAEGNSTYGFGYSNAGDGNAYAGDPNSVLQAQFNAADDNKQAVGAIGTDEASGRLGNAATETPVQVSENGSVVGAVENATGHENGNAVENIGRSGDEKQLADGYAVMSAEEDRLWNIVRANSLDFTSWTALIEETEKVAEDNILKIRRVYDAFLEEFPLCYGYWKKYADHEARVGSVDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPETVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWGRLALIYTRILENPNQQLDRYLSSFKELAGNRPLSELRIADEASAVVGAASETAGQTIEGEVRPDGAESSPKPVSAGLTEAEELEKYIVIREEMYKKAKEFDSKIIGFEAAIRRPYFHVRSLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEANKSMDLANNVLARATHVFVKRQPEIHLFSARFKEENEDITGARAAYQLVHDEISPGLLEAIIRHANMEYRLGKLEDAFSLYEQAIAIEKGKEHSQTLPLLFAQYSRFVFLASGNAEKARQILVEGLENVLTSKPLIEALLHFEAIQPWPKQVDIDFLDSLVVKFIMPNAESPNVASAAEREELSSIYLEFLNLFGDVQSIKKSENRHAKLFFPHRSMSELRKRHADDLLTSDKTKVARTYSVPSPAQPVVGTYPTAQNQWTNYGVQPQAWPPATQAQGQQWTAGYTQQASYGAYAGYGGNYANPQLPAPVPQSVPYAGAYPPAYPVQVRSSFSPSVFSTNNKLETQRLHL* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0476 815 Gene3D Tetratricopeptide repeat domain 159 325 IPR011990 GO:0005515
Lan9g0476 815 SMART hat_new_1 433 465 IPR003107 GO:0006396
Lan9g0476 815 SMART hat_new_1 184 216 IPR003107 GO:0006396
Lan9g0476 815 SMART hat_new_1 218 250 IPR003107 GO:0006396
Lan9g0476 815 SMART hat_new_1 578 610 IPR003107 GO:0006396
Lan9g0476 815 SMART hat_new_1 253 288 IPR003107 GO:0006396
Lan9g0476 815 SMART hat_new_1 537 575 IPR003107 GO:0006396
Lan9g0476 815 SUPERFAMILY TPR-like 161 320 IPR011990 GO:0005515
Lan9g0476 815 SUPERFAMILY TPR-like 376 680 IPR011990 GO:0005515
Lan9g0476 815 Gene3D Tetratricopeptide repeat domain 415 706 IPR011990 GO:0005515
Lan9g0476 815 PANTHER PRE-MRNA-PROCESSING FACTOR 39 10 760 - -
Lan9g0476 815 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 10 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0476 Lan-Chr9 7120017 7127823 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0476 K13217 - gmx:100787373 1240.71