Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0416 ATGGCTGCAACTCCATTCCTTATTCTTCAACCTCGTTTCAACTCGTACATCAACCCTCTCTTTCGTTCACTTTCCTCTTCACCTCTCTCATTCAATGCCACCACCGCAATTCAATCTTCTCTCTCTCCACCCTCCGAAACTCAATCCTCCACCGCCGCCGGTAGGTCCGGCGCGTTATCTCCCGCTCCGCCTCTCTCCGGCGCCGTTCAAAAGATCGATGTGAATCCTCCCAAAGGAACGCGTGATTTCCCGCCAGAAGATATGCGATTGCGTAACTGGCTATTCAGTAATTTCAGAGAGGTTTCGCGATTGTATGGGTTTGAGGAGGTTGATTTTCCGGTGCTTGAAAATGAGGCATTGTTCACTAGGAAAGCCGGGGAGGAGATTAAGGATCAGCTTTATTGTTTTGAAGATCAGGGTAGACGTCGTGTTGCACTGAGGCCTGAGCTTACTCCTTCTCTAGCAAGGCTGGTGATACAGAAAGGGAAGTCTGTGTCACTACCATTGAAGTGGTTCACTGTTGGGCAATGTTGGCGGTATGAGAGAATGACAAGGGGGCGTCGTCGTGAGCACTATCAGTGGAATATGGACATCATTGGCGTTCCTGGGGTTATGGCTGAAGCAGAGCTTATAGCTTCTATTGTCACATTGTTCAAGCGAATAGGAATTACAGAATCAGATGTTGGATTTAAGGTTTCCAGTCGAAAGGTTTTACAGGGAGTATTAAAGTGTTATTCCATACCTGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAAATTGAGAAGATTCCAGTTGAGGAGATAAAGAAAGAGTTGAAGGTTGCTGGTGTGTCAGAAGAGGCTGTCCATGAGCTATTAGAAGTTCTTTCTGTAAAGTCATTGGCAGAGTTGGAAGAGAGAGTCGGGAGCTGTGGGGAAGCAATAGCTGATCTGAAACAACTATTCTTACTTGCTGAGAAGTTTGGCTACTCAAAATGGCTTCAATTTGATGCATCAGTTGTTCGTGGCCTTGCTTACTACACTGGCATTGTATTTGAGGGTTTTGACCGAGAAGGAAAACTGCGAGCTATCTGTGGTGGTGGCCGATATGATCATTTGTTTTCAACTTTTGGTGCTGATGACATTCCTGCCTGTGGTTTTGGATTTGGTGATGCAGTCATAGTGGAATTGCTCAAAGAGAAGGGTCTGCTACCAGAGCTCAGCTTAGAAGTACATAACATTGTGTGTGCGTTGGATGAAGATCTTCAAGCTGCTGCTGCTATGGTTGCTAATATTCTTAGAGAAAAGGGACAGAGTGTCGACTTGGTTTTGGAAAGCAAACCTCTTAAATGGGTTTTTAAGCGGGCATCCCGAACAAATGCCGAACGGCTGGTTATAGTGGGGAGTTCCGAGTGGCAAAGGGGTATGGTCGGTGTCAAAATTCTGTCTACTGGTGAACAGTACGAGGTTAAACTGGATGATCTAAAATAA 1476 0.4539 MAATPFLILQPRFNSYINPLFRSLSSSPLSFNATTAIQSSLSPPSETQSSTAAGRSGALSPAPPLSGAVQKIDVNPPKGTRDFPPEDMRLRNWLFSNFREVSRLYGFEEVDFPVLENEALFTRKAGEEIKDQLYCFEDQGRRRVALRPELTPSLARLVIQKGKSVSLPLKWFTVGQCWRYERMTRGRRREHYQWNMDIIGVPGVMAEAELIASIVTLFKRIGITESDVGFKVSSRKVLQGVLKCYSIPENLFGKVCVIIDKIEKIPVEEIKKELKVAGVSEEAVHELLEVLSVKSLAELEERVGSCGEAIADLKQLFLLAEKFGYSKWLQFDASVVRGLAYYTGIVFEGFDREGKLRAICGGGRYDHLFSTFGADDIPACGFGFGDAVIVELLKEKGLLPELSLEVHNIVCALDEDLQAAAAMVANILREKGQSVDLVLESKPLKWVFKRASRTNAERLVIVGSSEWQRGMVGVKILSTGEQYEVKLDDLK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0416 491 Gene3D - 399 491 IPR036621 -
Lan9g0416 491 Pfam Anticodon binding domain 410 490 IPR004154 -
Lan9g0416 491 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 79 400 IPR006195 -
Lan9g0416 491 MobiDBLite consensus disorder prediction 37 83 - -
Lan9g0416 491 MobiDBLite consensus disorder prediction 37 56 - -
Lan9g0416 491 SUPERFAMILY Class II aaRS and biotin synthetases 76 397 IPR045864 -
Lan9g0416 491 TIGRFAM hisS: histidine--tRNA ligase 76 486 IPR015807 GO:0004821|GO:0005524|GO:0006427
Lan9g0416 491 CDD HisRS-like_core 87 394 IPR041715 -
Lan9g0416 491 SUPERFAMILY Class II aaRS ABD-related 407 490 - -
Lan9g0416 491 Hamap Histidine--tRNA ligase [hisS]. 72 491 IPR015807 GO:0004821|GO:0005524|GO:0006427
Lan9g0416 491 Pfam Histidyl-tRNA synthetase 79 383 IPR041715 -
Lan9g0416 491 PANTHER HISTIDYL-TRNA SYNTHETASE 70 491 IPR004516 GO:0005737
Lan9g0416 491 Gene3D Bira Bifunctional Protein; Domain 2 70 397 IPR045864 -
Lan9g0416 491 PIRSF His-tRNA_synth 70 491 IPR004516 GO:0005737
Lan9g0416 491 Coils Coil 296 316 - -
Lan9g0416 491 PANTHER HISTIDINE--TRNA LIGASE, MITOCHONDRIAL-RELATED 70 491 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0416 K01892 - gmx:100793186 790.415