Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0337 ATGGCGAATCTACCACTCATCCTCATCCAAATCATCATCATATTCATTTTCACCCAATCACTCTTCGCCACGTCACACCCACCAAACCCAATCCCTATAACCGTTTCCGTCTCCGACTTCGGAGCCATCGGCGACGGCATCCACTACGACACCGTCCCCATCCAATCCGCCATAAACTCCTGCCCTGACACCTTCCCCTGCCACGTCACCTTCCCGGCGCCGAGGAAATACCTGACGGCGACGGTGTTCCTAAAATCCGGCGTCGTGTTAAACGTGGAGCCAGGTGCGACGATCCTGGGAGGAACGAGGATTGAAGACTATCCGAGGGAGTCGTCGCGGTGGTACGTGGTGTTGGCGGAGAACGCGACGGAGGTCGGAATCGGAGGCGGTGGAGTGGTGGATGGACAGGCGGAGAAGTTTGTGGTGAGAGAAGATCGAAGGAAGAATGTGATGGTGAGTTGGAATAAAACAGGGGCGTGTTTAGGAGATGAATGCAGACCTAGACTTGTTGGTTTCTTGGATTCCGTCAATGTTAGACTTTCCAACATTACTCTCAACCAACCTGCTTATTGGTGCTTACATATAGTAAGGAGTAACAACATTTCCATTGAGGATACTACAATATATGGAGACTTCAATATACCAAACAATGATGGGATAGACATAGAGGACTCAAATAACACAGTAATCACTCGATGCCACATTGATACAGGTGATGATGCAATCTGTCCAAAATCTTACACTGCTCCTGTTTACAACCTCACTGTCACAAACTCTTGGATTCGATCCAAATCTTCGGCGATTAAACTCGGCAGCGCTAGTTGGTTTGATTTCAACCACTTTGTGTTTGACAATATCACTATTGTAGACTCTCATAGAGGACTTGCATTCCAAATCCGCGATGGAGGAAATGTAAGTGACATTGTTTTCTCAAACATAAATATCAGCACAAGATACTATGATCCATTATGGTGGGGAAGAGCAGAGCCTATCTATGTCACATCTTGTCCAAGAGACTCAACCTCAAAGGAGGCTTCAATCTCAAATATACATTTCATCAACATCACTGCAAATTCCGAAAATGGCATCTTCCTATCTGGTTCAAAGAGAGGTTTGTTAAGAAATTTGAGATTCATCAACATGAATATAACTTACACAAGGTTCACCAATTATTCTGGTGGGTTATTGGACTATAGGCCAGGATGCCAAGAATTGGTGAAACATGGCACAGCAGGCATAATGATGGAGTATATTGAAGGTCTTGAGGTTAAAAATGTTGAAATGAAATGGTCAAACTATGAACTAGAGCAATGGAATAATCCTTTGGAGTTTAAGCCATCTACTGTGAACAATATCTCTTTTCTTAATTTTAATTCTGGTTTGTACACAAATAGCAAATCAAGGTAA 1407 0.4385 MANLPLILIQIIIIFIFTQSLFATSHPPNPIPITVSVSDFGAIGDGIHYDTVPIQSAINSCPDTFPCHVTFPAPRKYLTATVFLKSGVVLNVEPGATILGGTRIEDYPRESSRWYVVLAENATEVGIGGGGVVDGQAEKFVVREDRRKNVMVSWNKTGACLGDECRPRLVGFLDSVNVRLSNITLNQPAYWCLHIVRSNNISIEDTTIYGDFNIPNNDGIDIEDSNNTVITRCHIDTGDDAICPKSYTAPVYNLTVTNSWIRSKSSAIKLGSASWFDFNHFVFDNITIVDSHRGLAFQIRDGGNVSDIVFSNINISTRYYDPLWWGRAEPIYVTSCPRDSTSKEASISNIHFINITANSENGIFLSGSKRGLLRNLRFINMNITYTRFTNYSGGLLDYRPGCQELVKHGTAGIMMEYIEGLEVKNVEMKWSNYELEQWNNPLEFKPSTVNNISFLNFNSGLYTNSKSR* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0337 468 Pfam Glycosyl hydrolases family 28 97 386 IPR000743 GO:0004650|GO:0005975
Lan9g0337 468 PANTHER PECTIN LYASE-RELATED 24 461 - -
Lan9g0337 468 SUPERFAMILY Pectin lyase-like 17 398 IPR011050 -
Lan9g0337 468 SMART pbh1 225 246 IPR006626 -
Lan9g0337 468 SMART pbh1 305 327 IPR006626 -
Lan9g0337 468 SMART pbh1 251 272 IPR006626 -
Lan9g0337 468 SMART pbh1 342 367 IPR006626 -
Lan9g0337 468 SMART pbh1 198 224 IPR006626 -
Lan9g0337 468 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 24 461 - -
Lan9g0337 468 Gene3D - 14 394 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0337 Lan-Chr9 5199955 5203026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0337 19 463 Glycoside Hydrolase AT3G57790 66.812 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0337 - - gmx:100794954 813.142