Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0299 ATGCATTTCTTAACTCGTCTTCATCTCTTCACAAAGCCTCCCTCCTCCACTTTCCTCTGCACCTTCTTCCAGAACGGAGGTAGAGAAATATTGACCAGGGTTGGCATGAACATGTGCTCGCTTTCTTCTGCAGTTTCAGCTGAAACTTCAGATTTAGAACATGATGAGACACATGATATTGTTAAAGCAACAGAGAAAGCCGATGCACTTCGTTTGGCGGTCTCGCAGCTTGCTAGCGAGTTTAGCAAGGAGTCAATGCTATCCATGCAGAAGTTTTTTGGTGTCCGCCGTGCTCATGTGGTACCTTCAGGCTCCTTGAAGCTTGACCTAGCTCTTGGAATTGGAGGATTACCAAAGGGTAGGATTGTAGAAATTTATGGTCGAGAAGCAGCTGGCAAGACAACACTCGCACTTCATGTTATTAAAGAAGCTCAAAAGCTTGGAGGATACTGTGCATATCTTGATGCAGAACATGCATTGGACCTTTCACTTGTAGAAGCAATGGGTGTAAATACCAAAAACCTTCTTATCTCACATCCTGATTGTGCTGAAAACTTGTTGAGCATGGTTGACACATTGACCAAAAGTGGAGCTGTAGATGTCATTGTTGTTGATAGTGTTGCCGCCCTTGTCCCCAAGTTGGAACTTGATGAATTAGGAATTTCCACGAAACAAGATTTTCTGTCGCGAATGATGACTCAAGCACTGCGGAAAATTCATTACTCATTGTCTCACTCCCAAACTCTTATAATTTTTGTTAATCAGATTCGATTTAGTCCGAAATCAGGTAAGGGATGTGGACCTATGGAAGAGGTCACTTGTGGTGGAAATGCCTTGAGATTCTACGCAGCACTTCGTTTAAGGCTTTCAAGAATCGGATTGATCAAAACTGAAGATAAGGTCTCGGTGCAAGTGGTAAAAAATAAACTAGCACCAGCAACGATGAAAAAGGCGGAACTAGGCATCAAGTTTGGAAGAGGCTTTTGCCATGAAAAAGAGGTCTTAGATTTGGCTTGTGAACATGGAATCATTGTGAAATATGAAGGAAGCTACTTCATTGAAGGGCAAAGTTTTAATAGTAGAGAAGCAGCTGAACTTTATTTGGCTAAAAATGACAGGGTTTGTGTCAAATTGGTTATGGACTTAAGAAGACTTTATTTTTTACAAATCTAG 1173 0.4152 MHFLTRLHLFTKPPSSTFLCTFFQNGGREILTRVGMNMCSLSSAVSAETSDLEHDETHDIVKATEKADALRLAVSQLASEFSKESMLSMQKFFGVRRAHVVPSGSLKLDLALGIGGLPKGRIVEIYGREAAGKTTLALHVIKEAQKLGGYCAYLDAEHALDLSLVEAMGVNTKNLLISHPDCAENLLSMVDTLTKSGAVDVIVVDSVAALVPKLELDELGISTKQDFLSRMMTQALRKIHYSLSHSQTLIIFVNQIRFSPKSGKGCGPMEEVTCGGNALRFYAALRLRLSRIGLIKTEDKVSVQVVKNKLAPATMKKAELGIKFGRGFCHEKEVLDLACEHGIIVKYEGSYFIEGQSFNSREAAELYLAKNDRVCVKLVMDLRRLYFLQI* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0299 390 PANTHER DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL 25 387 - -
Lan9g0299 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 315 IPR027417 -
Lan9g0299 390 SMART AAA_5 119 293 IPR003593 -
Lan9g0299 390 Pfam recA bacterial DNA recombination protein 69 328 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lan9g0299 390 Gene3D - 96 386 IPR027417 -
Lan9g0299 390 PANTHER RECA 25 387 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lan9g0299 390 ProSiteProfiles RecA family profile 2. 263 333 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lan9g0299 390 ProSiteProfiles RecA family profile 1. 97 256 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Lan9g0299 390 Coils Coil 60 80 - -
Lan9g0299 390 ProSitePatterns recA signature. 278 286 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lan9g0299 390 PRINTS RecA protein signature 155 184 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lan9g0299 390 PRINTS RecA protein signature 189 218 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lan9g0299 390 PRINTS RecA protein signature 227 256 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lan9g0299 390 PRINTS RecA protein signature 275 303 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lan9g0299 390 PRINTS RecA protein signature 304 333 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lan9g0299 390 PRINTS RecA protein signature 357 374 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0299 Lan-Chr9 4034392 4044810 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0299 - - gmx:100777423 562.762