Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1939 ATGGGTTCTTTTTCATTTCATAGTTTTGTAACATTAGCTGTTTTGTTTGTGAATGTGTTGGTGTTTTGCGATGGAGGGAAAACAAGCACTTTTGTTAGGAAAGCTGAGAAAGCTATAGACATGCCACTTGATAGCGATGTCTTTGATGTTCCTCATGGTTACAATGCTCCTCAGCAGGTTCATATAACACAAGGTGATCTTGTTGGCAGAGCTGTGATTGTGTCATGGGTCACAATTGATGAACCTGGTTCAACCATAGTGCGTTATTGGACTGACAAGCATAGCCATCAAAAGAAAACAGCTAAAGGCAAAATTGTTACTTATAGGTTCTTCAATTACACTTCTGGCTTTATTCATCATACTACCATCAAGCATTTGAAGTATAACACTAAATATCACTATGAAGTTGGATATGGGAATACCACACGCCAATTTTGGTTTATAACTCCTCCTCCAGTTGGTCCTGATGTGCCTTACACTTTTGGTCTCATAGGTGATCTTGGTCAGAGTTATGATTCGAATAAAACACTTACTCACTATGAACATAACCCGAGAAAAGGGCAGGCTGTGCTCTATGTTGGAGACCTTTCCTACGCAGATAACTACCCCAATCATGATAATGTTAGATGGGATACGTGGGGAAGGTTCACAGAAAGGGTTGTTGCTTATCAACCTTGGATATGGACTACAGGGAACCATGAACTTGATTTTGTTCCAGAGATTGGTGAAACTGTACCTTTCAAGCCTTTTACAAACCGTTACCATGTTCCTTTTAAACCATCAGAGAGTACTGAACCCTTCTGGTATTCTATCAAGAGAGGTCCTGCACACGTCATTGTCTTAGCCTCATACCAAGCCTATGGAAAATATACACCACAATACAAATGGCTTGAAGAGGAGTTGCCGAAAGTCAACAGGAAGGAGACTCCTTGGTTGATTGTTCTGGTGCATTCACCTTGGTATAACAGCTACAACTATCATTTTATGGAAGGGGAAACAATGAGAGTAATGTTTGAGTCCTGGTTTGTGAAGTACAAGGTTGATGTTGTCTTTTCTGGCCATGTTCATGCCTATGAACGATCTGAACGCGTGTCAAATGTGAAGTACCATATTGTAAATGGTTTGTGTACTCCTGTAAAAGATCAATCAGCTCCGGTATATATAACCATTGGGGATGGAGGAAACCTTGAAGGCTTAGCAAACAACATGACAGAACCACAGCCAAAGTACTCAGCATATAGAGAGGCAAGCTTTGGGCATGCCATTTTCGACATAAAGAACCGGACACATGCTCACTATAGCTGGCACAGGAATCAAGATGGATATGCTGTGGAGGCTGATTCTCTATGGTTTTTCAACAGATACTGGCACCCAGTTGATGATTCCACAACTCACTCACATTAG 1404 0.411 MGSFSFHSFVTLAVLFVNVLVFCDGGKTSTFVRKAEKAIDMPLDSDVFDVPHGYNAPQQVHITQGDLVGRAVIVSWVTIDEPGSTIVRYWTDKHSHQKKTAKGKIVTYRFFNYTSGFIHHTTIKHLKYNTKYHYEVGYGNTTRQFWFITPPPVGPDVPYTFGLIGDLGQSYDSNKTLTHYEHNPRKGQAVLYVGDLSYADNYPNHDNVRWDTWGRFTERVVAYQPWIWTTGNHELDFVPEIGETVPFKPFTNRYHVPFKPSESTEPFWYSIKRGPAHVIVLASYQAYGKYTPQYKWLEEELPKVNRKETPWLIVLVHSPWYNSYNYHFMEGETMRVMFESWFVKYKVDVVFSGHVHAYERSERVSNVKYHIVNGLCTPVKDQSAPVYITIGDGGNLEGLANNMTEPQPKYSAYREASFGHAIFDIKNRTHAHYSWHRNQDGYAVEADSLWFFNRYWHPVDDSTTHSH* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1939 467 PANTHER PURPLE ACID PHOSPHATASE 6 465 - -
Lan8g1939 467 SUPERFAMILY Purple acid phosphatase, N-terminal domain 38 151 IPR008963 GO:0003993|GO:0046872
Lan8g1939 467 Gene3D - 56 152 - -
Lan8g1939 467 PANTHER ACID PHOSPHATASE RELATED 6 465 IPR039331 GO:0003993
Lan8g1939 467 Pfam Calcineurin-like phosphoesterase 160 358 IPR004843 GO:0016787
Lan8g1939 467 SUPERFAMILY Metallo-dependent phosphatases 155 462 IPR029052 -
Lan8g1939 467 Pfam Purple acid Phosphatase, N-terminal domain 57 147 IPR015914 GO:0003993|GO:0046872
Lan8g1939 467 Pfam Iron/zinc purple acid phosphatase-like protein C 384 443 IPR025733 -
Lan8g1939 467 Gene3D - 154 463 IPR029052 -
Lan8g1939 467 CDD MPP_PAPs 155 453 IPR041792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1939 Lan-Chr8 25394472 25397056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1939 44 441 Miscellaneous Gene Families AT1G13900 24.893 7.37e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1939 K22390 - gmx:100807555 838.565