Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1931 ATGGCTATGGCTACTCTCACTCCTCCGATGCTTTCTTCTTCTCACGTTTCTTCTTCCTCTCTCTCTCTCCGCTCTTCCATTTCTCTCTTCCCTTTCATTTCCACAAAGCCACCCAACTGGCCCCATCTCAACTTCACCAGGTATGTCGTTTCTGCAGAGGTTGAAACAGTTGAAGAAGAAGATGAAGAAGGAGTTGTTGATGATGTCTCCAACGACACTCTCATCATCACCACTAAGCCTAAGAAAGGGAAAGCTGCTTTGCCTCTCAAGAGGGACAGGCTGAGGTCCAAGAGATTCTTGGAAATTCAAAACATGAGGGAGCATAAGAAAGAGTATGACTTGAACACAGCAATATCATTGGTTAAAGAAACAGCTAAAACCAAATTTGTAGAGACAGTGGAAGCACATTTCCGCCTCAACATTGATCCTAAATATAATGATCAACAGTTAAGAGCTACCGTTAGTCTCCCTAAGGGAACTGGAAAGCCTGTTAAAGTCGCAGTTCTTACTCAAGGTGAAAGATTCGATGAAGCCACAAATGCAGGAGCTGATTTGGTCGGAGGAGAAGACCTCATAGAACAGATCAAAGGAGGCTTCATGGAATTTGATAAATTAATTGCTTCTCCTGATATGATGCCTAAGGTTGCTAGCCTAGGTAAGATTCTGGGGCCAAGAGGACTGATGCCAAATCCAAAAGCGGGCACTGTAACTCCTAATATTCCTCAGGCTATAGCAGAATTCAAACAGGGAAAAGTTGAATTCAGAGCAGATAAAACTGGAATTGTGCACTTACCTTTTGGAAAAGCTGATTTTCCGGAAGAGGATCTTCTTGTAAACTTGGTTGCTGCAATAAGATCAGTAGAGACAAACAAACCATCAGGCGCGAAAGGTGTCTACTGGAAAAGCGCTCACATATGCTCAGCAATGGGGCCTTCGATTCGGTTAAACATCAGGGAGATGCTTGATTACAAACTTCCATCAGAATAG 987 0.4326 MAMATLTPPMLSSSHVSSSSLSLRSSISLFPFISTKPPNWPHLNFTRYVVSAEVETVEEEDEEGVVDDVSNDTLIITTKPKKGKAALPLKRDRLRSKRFLEIQNMREHKKEYDLNTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTGKPVKVAVLTQGERFDEATNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFPEEDLLVNLVAAIRSVETNKPSGAKGVYWKSAHICSAMGPSIRLNIREMLDYKLPSE* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1931 328 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 109 320 - -
Lan8g1931 328 ProSitePatterns Ribosomal protein L1 signature. 212 230 IPR023673 -
Lan8g1931 328 Pfam Ribosomal protein L1p/L10e family 122 311 IPR028364 -
Lan8g1931 328 Gene3D - 159 250 IPR016095 -
Lan8g1931 328 Gene3D - 112 315 - -
Lan8g1931 328 SUPERFAMILY Ribosomal protein L1 98 317 IPR023674 -
Lan8g1931 328 TIGRFAM rplA_bact: ribosomal protein uL1 95 319 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Lan8g1931 328 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN, LARGE 109 320 - -
Lan8g1931 328 CDD Ribosomal_L1 114 315 IPR028364 -
Lan8g1931 328 Hamap 50S ribosomal protein L1 [rplA]. 90 320 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1931 Lan-Chr8 25344336 25347067 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1931 K02863 - gmx:100808549 470.314