Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1927 ATGACAAGTAGTAACAAGAATATGAATGCTGATTGCCTTTCTTTTCAAAAAGATGAAGAGAATAGAAGAAGAAGATCTGCAAATTATAAACCCAACATTTGGAAACATGGCTTCCTCCACTCACTTCCCACTAAATATGATAAAGAAGAATCTGCCATGCAGTTGGTGAGGCTGTTGATTGAAGTAAAGGGTATTTTTGTTGAGAAGAGTGAGGTTTTGCAAAAACTAGAGTTAGTTGATTGGATCCAGAAACTAGGTGTTGCTAACTATTTTGAGAAAGAAGTGAATGAGTTTCTTGAAACTACAACTTTCAAGAATCCAAGTGCACAAGAGAGTTTGCATGTACCTGCACTAAGCTTCAGACTTCTAAGGCAACATGGATATAAGGTTTCACCAGATGTACTACTACGTAAGTTCTTCAATGAAAATGGGACAATGTTGTCGAAAATCTCATGTGGCGATGATGTTAAAGATATTATGGAGCTTTTTGAGGCCTCACACTTACGCTTTGAAGAAGAAAATATCTTGGAAGAGGCCAAAAGTGTTGTAATAAATTCCTTGAAGGATACTTTCAATGTTCCTAGTTCCATCAACATCAATTATGAACATTCTGAAAGAGTTTTCCATGCATTGGAGCTTCCTTCTCATTGGAGAGTTCCATGGTTTGATGTCAAATGGCATGTTAAGCAATACCACAAGGAGAAACATATGGAGCACCATTTACTTCAATTGGCTAAATTAAATTTCAACCTAATTCAGCTCCAACTTCGAAAGGAGGTCAAGGAATTATCCAGGTGGTGGGAGAATCTTGGAATTGAAAAAGAGTTGAGCTTTGCAAGAAATAGGTTGGTTGAAAGCTTCATGTGTTCAGCAGGAGTTGCTGTTCAGCCTAAGTACAAATCCTTAAGGAAATGGCTAACTAAACTAATTACTTTCATACTAGTGATTGATGATGTTTATGATATACATGCTTCATTCGAAGAAGTCAAGCTGTTCACAGCTGCATTTGAAAGATGGGATGCCAAAGAAATTGAAGAACTCCCAGAGTGCATGAGGATTTGCTTCAATTCACTTAAAGAAGTCACAGATGAAACAGCTTATGAAATTGCAGGAGAAAAGAACTTCAATATGGTGTTATCTTACATAAAGAAAGCGTGGATAGAGTTTTGCAAGGCATTATTCGAGGAAGCAAAGTGGTACAGCATGGAATATATTCCATCGTTGAAAGAATATCTAAGCAATGCTTGGATTTCATCTTCTGGATCAGTAATTCTACTACACATATATTTTGCTACAATGCATGAAGAAGTAACATATCATGAGATAGACCAATTTCTACACAAATATGAAGATTTGATGTACAACATATCTCTTATAATTCGACTATGCAATGATTTAGGAACCACAGTGGCTGAAAGAGAAAGAGGTGATGCTGCTTCATCAATCCTATGTTATATGAATGAAATGGAAGTTAGTGAGGATAAAGCAAGAAAGCACATAGAAGAGATGATAAACAATGCATGGAAGAAGATAAATTGGTATGGCACCAATGGAGTTGGTTCAATGGAACCATTTATAACACAAGCTAGAAATGCAGCTCGTATGGCTCATACATTATATCAAAATGGTGATGGGTTTGGTATCCAGGACCTTGATATCAAAGAACATATATCATCACTGCTTGTTGAACCCCTTTAG 1698 0.3651 MTSSNKNMNADCLSFQKDEENRRRRSANYKPNIWKHGFLHSLPTKYDKEESAMQLVRLLIEVKGIFVEKSEVLQKLELVDWIQKLGVANYFEKEVNEFLETTTFKNPSAQESLHVPALSFRLLRQHGYKVSPDVLLRKFFNENGTMLSKISCGDDVKDIMELFEASHLRFEEENILEEAKSVVINSLKDTFNVPSSININYEHSERVFHALELPSHWRVPWFDVKWHVKQYHKEKHMEHHLLQLAKLNFNLIQLQLRKEVKELSRWWENLGIEKELSFARNRLVESFMCSAGVAVQPKYKSLRKWLTKLITFILVIDDVYDIHASFEEVKLFTAAFERWDAKEIEELPECMRICFNSLKEVTDETAYEIAGEKNFNMVLSYIKKAWIEFCKALFEEAKWYSMEYIPSLKEYLSNAWISSSGSVILLHIYFATMHEEVTYHEIDQFLHKYEDLMYNISLIIRLCNDLGTTVAERERGDAASSILCYMNEMEVSEDKARKHIEEMINNAWKKINWYGTNGVGSMEPFITQARNAARMAHTLYQNGDGFGIQDLDIKEHISSLLVEPL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1927 565 SFLD Isoprenoid Synthase Type I 239 564 - -
Lan8g1927 565 MobiDBLite consensus disorder prediction 1 26 - -
Lan8g1927 565 PANTHER OS04G0344100 PROTEIN-RELATED 23 565 - -
Lan8g1927 565 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 30 236 IPR008930 -
Lan8g1927 565 Gene3D Farnesyl Diphosphate Synthase 31 555 IPR008949 -
Lan8g1927 565 SUPERFAMILY Terpenoid synthases 239 565 IPR008949 -
Lan8g1927 565 Pfam Terpene synthase, N-terminal domain 33 211 IPR001906 GO:0010333|GO:0016829
Lan8g1927 565 Gene3D - 70 237 IPR036965 GO:0010333|GO:0016829
Lan8g1927 565 PANTHER ALPHA-FARNESENE SYNTHASE 23 565 - -
Lan8g1927 565 CDD Terpene_cyclase_plant_C1 24 564 IPR044814 GO:0010333|GO:0016102
Lan8g1927 565 Pfam Terpene synthase family, metal binding domain 242 510 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lan8g1927 565 SFLD Terpene Cyclase Like 1 C Terminal Domain 239 564 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1927 Lan-Chr8 25319823 25324348 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1927 K14173 - gmx:100812119 741.495