Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1903 ATGGCTTCTGATCCTGAACAACCTCCTATTTCCTTTCTCGCTAAGGAAGGAAAATCATCTGGAGAGATTGGCAGTGCAAGGGAACCTCTGCTTAATGTTAATGGGGCTCATGACTCTGAAAACTATTCTATCTATGCTGCAATTCTCCCATTTCTCTTCCCAGCTCTTGGTGGGTTACTGTATGGCTATGACATTGGTGCCACATCTTCTGCAACAATTTCTATTCAGTCATCAACAAGCAGTGGAATAACTTGGTACAACTTGTCGTCTGTTGAAATTGGGCTTGTAACTAGTGGATCATTATATGGTGCCTTGATTGGCTCTTTGTTGGCCTTCAGTATTGCTGACTTCATAGGTAGAAAAAGGGAGCTGATTGCAGCTGCGTTAGTGTATCTTGTTGGAGCCCTTGTAACAGCAGTAGCTCCTAATTTTCCTGTATTGGTGGTTGGGAGACTTGTATTTGGCCTAGGAATTGGACTGGCGATGCATGCTGCTCCGATGTACATTGCAGAGACAGCTCCAACATCAATACGTGGATTACTTATCTCTTTGAAAGAGTTCTTTATAGTACTTGGGATGGTTGCAGGATATGGAATAGGTAGCCTTTTGGTAGACACTGTATCTGGGTGGCGGTACATGTTTGGAGTTAGTAGTCCTTTGGCATTAATCATGGGAATTGGAATGTTTTTGCTCCCAGATTCTCCTAGATGGCTACTTTTATGTGCTATACAGGGAAAAGGGGATAGTAAGAATTTGAAAGACAGGGCTATTCGTTGTTTGTGCCAGCTTCGAGGTCAATCTCTTGGTGTCTCAGCTCCTCAGCAAGTAGATGAGATTCTGGCAGAGCTATCTTATGTAGGTGAAGAAAAAGAAGTTACACTTGGAGAATTGTTCCGAGGGAAATGCAAGAAAGCCCTCGTGATCGGAGGAGGATTGGTCTTGTTTCAACAGATCACAGGGCAACCAAGTGTGCTCTACTATGCTGGATCAATCCTTCAGAGCGCAGGATTCTCCGCAGCATCTGATGCAACCCGGGTCTCTATTCTCCTTGGCCTTTTCAAGTTGATTATGACTGGAGCTGCTGTTGGTGTTGTTGATAGACTCGGGAGGAGACCTTTACTACTTGGAGGAGTTTCAGGGATGGCTATCTCTTTGTTCCTTCTGGGTTCATATTACATTTTCTTGGACAATGTAGCAGTTGTTGCTGTAATTGGTCTGCTGTTGTACGTAGGATGTTATCAGATTTCATTTGGTCCAATTGGTTGGCTTATGATATCAGAGGTTTTTCCCTTGCGCCTAAGAGGTCGAGGACTTAGTATAGCTGTTCTTGTCAATTTTGCTGCAAATGCTCTTGTGACATTTGCTTTTTCTCCTCTGAAGGAATTACTAGGAGCAGGAATCTTGTTTTACATATTTTGTGCAATAGCTGCAGCATCTCTTGGATTCATATACTTTATTGTGCCAGAAACCAAGGGACTTACCCTAGAGGAGATTGAGGCCAAATGTTTATAA 1512 0.4319 MASDPEQPPISFLAKEGKSSGEIGSAREPLLNVNGAHDSENYSIYAAILPFLFPALGGLLYGYDIGATSSATISIQSSTSSGITWYNLSSVEIGLVTSGSLYGALIGSLLAFSIADFIGRKRELIAAALVYLVGALVTAVAPNFPVLVVGRLVFGLGIGLAMHAAPMYIAETAPTSIRGLLISLKEFFIVLGMVAGYGIGSLLVDTVSGWRYMFGVSSPLALIMGIGMFLLPDSPRWLLLCAIQGKGDSKNLKDRAIRCLCQLRGQSLGVSAPQQVDEILAELSYVGEEKEVTLGELFRGKCKKALVIGGGLVLFQQITGQPSVLYYAGSILQSAGFSAASDATRVSILLGLFKLIMTGAAVGVVDRLGRRPLLLGGVSGMAISLFLLGSYYIFLDNVAVVAVIGLLLYVGCYQISFGPIGWLMISEVFPLRLRGRGLSIAVLVNFAANALVTFAFSPLKELLGAGILFYIFCAIAAASLGFIYFIVPETKGLTLEEIEAKCL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1903 503 Pfam Sugar (and other) transporter 53 500 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lan8g1903 503 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 4 503 - -
Lan8g1903 503 CDD MFS_GLUT10_12_Class3_like 53 498 - -
Lan8g1903 503 ProSitePatterns Sugar transport proteins signature 2. 153 178 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan8g1903 503 PRINTS Sugar transporter signature 58 68 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan8g1903 503 PRINTS Sugar transporter signature 148 167 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan8g1903 503 PRINTS Sugar transporter signature 316 326 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan8g1903 503 PRINTS Sugar transporter signature 403 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan8g1903 503 PRINTS Sugar transporter signature 426 438 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan8g1903 503 ProSitePatterns Sugar transport proteins signature 1. 361 377 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan8g1903 503 Gene3D MFS general substrate transporter like domains 40 501 IPR036259 -
Lan8g1903 503 ProSiteProfiles Major facilitator superfamily (MFS) profile. 50 491 IPR020846 GO:0022857
Lan8g1903 503 TIGRFAM SP: MFS transporter, sugar porter (SP) family 42 498 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan8g1903 503 SUPERFAMILY MFS general substrate transporter 51 499 IPR036259 -
Lan8g1903 503 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 1 4 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1903 Lan-Chr8 25189957 25199199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1903 1 503 Organic Solute Cotransporters AT5G17010 75.050 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1903 - - lja:Lj3g3v3639770.1 778.089