Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1837 ATGGATTATCGGGTTGATGCTTTAGATGATGAGAGCAAGAGAGTAGGTGACGGGGATTCTGAAAATTTGAAGGATTTGGGTGGAGAGGAGGTTTTTGAGGAGGCAATGGAGCCACAAGATCATTTCCATGATCAAGGATCCACACTCGATTTGCCGGATGTTGATGTTGATAAATGTGACGAAACTGACACAGTGAGTCCATTGGCTTCAGCCTTAGTTGATGAAACTTTACATGTCACGCTGGAAACGGATAATTTTGAGGAGGCAATTGATGTTGTTGCTGGCGAATCTGAGAAACAAACAGAGGGGGAGCCTGAGGTAATCGCTGCTGAATCTGAGAAACACATAGAGGGAGAGGCTGAAATAATTGCTGGTGAATCTGAGAAACAGACTGAATTAATTGCTGACCAGGAGCTTGAAAGGGATGGGCAGCGGCTTGATAATGTCCATCTGGATGGAGTTGATTCTGGAGGGACTGGAGATGGACAGCTTTCTGGTGATTCCTGCGGTATGCAAGACGATAATTTCAATAGCAGTGATTTGAGTGGTGGAAAGGAAGAATCTGGTTTAAGTAGTGACGGAGGGCTGGTAGCTACAGAGAAAGGAGCCACAGAGGAGGGAAACTCTGGTTTGCTGAGTGAAAATTCTGAAATTGATGATTCAAAATTCCTGACTCCAAGAGAAAATGGTGCTGCTGTCTTGGAAAATGGTAGCACAGACAAGGTGGACTATGTTGTTACTGAATCTAATTTAGAATCTGAATCTAATGAGGTGGTGGTAAACCAAGGTACTATTGCTGAGGATTTGAAGGATGGTGACCCAGTACCGGAATTTAGAGACCACAAGATAGAGGAAGTACATGACATTTCAGCTGACAGTAACAACGATTTAAAACGTCAAGGTGAAGTGATTAGTGATATGAAGGATGGGACCCCTGGCACTGATTTCAGCAACGAGGATAGAAATGATAGAGACATCTCCATCACTGACACAAAGATCACTGAACCTATAGATATTGAATATGAAGATGCTAAAGCTGGATCAGACTCAGAGAAGCCGGAAGCAATTGGTGAAATAAGAACTTCTCCTGACCTGCATGAAACTGTGGAGGAAAGGGAAGAAATGCTACCTGCTGTTAACTCATTGCCCCCCGAAAATTCTGCTGATGAGATACCATCTGTTCAGGCAAGCGCAGCTGATCCGAAAGAAGGAAGTAATAAGGATGCTCAGTCTCATGTTTCTGAAGAAATTCACAGAGATCGTGATAACTCTTCTGTGGCAGAGGAGCCTGAAAAGATACAGGAGAAGAATTTGGAAGTGAAGGAAACCACTCAAGTGACTAAAGAACTGAAGATTCAGCCTGCAAACAAGCTTCCTTCTGCATCTGAAAATTCTGCTAGTGCTGTTCCCCCTCCTGTTCGTCCAGCTGGCCTTGGCCATGCAGCTCCACTACTGGAACCTGCTTCTCGGGGAGTGCAGCAGTCTCGTGCGAATGGTGCTGTGGCTAACACACAGTCCCAACAAGTGGATGACTCTTCAAATGGGGAGGCCGAGGAGTATGATGAGACTCGTGAGAAACTTCAGATGATTAGGGTGAAGTTTTTACGGCTAGCTCATAGGCTTGGGCAGACTCCACACAATGTTGTTGTAGCTCAAGTTTTGTATAGGCTAGGGCTGGCTGAGCAGCTTAGAGGAAGGAATGGGGGTCGTGTTGGTGCTTTTAGCTTTGACCGTGCAAGTGCAATGGCCGAACAGCTAGAAGCAGCAGGTCAGGACCCACTTGATTTCTCTTGTACGATAATGGTTCTTGGAAAGACGGGAGTTGGTAAAAGTTCTACCATCAATTCTATTTTTGATGAAGTTAAGTTTAATACTAGTGCCTTTCATATGGAAACCAACAAGGTTCAGGATGTCGTGGGAACTGTACAGGGGATTAAGGTACGAGTCATTGATACACCAGGACTTCTACCCTCCTGGTCAGACCAGAGAAGTAATGAGAAGATCTTGCACTCTGTCAAGCGCTTTATTAAGAAAACACCACCTGACATTGTGTTGTATCTTGATAGGTTGGATATGCAGAGCAGGGATTTTAGTGATATGCCACTTTTAGACACAATTACTGATATATTTGGACCATCTATTTGGTTCAATGCTATTGTGGTTCTGACCCATGCAGCATCTGCTCCACCTGATGGCCCTAATGGTACTGCTTCCAGTTATGACATGTTTGTCACTCAACGCTCCCATGTTGTCCAACAAGCCATTCGTCAAGCAGCTGGAGACATGCGTCTTATGAATCCCGTATCGCTGGTGGAAAACCATTCTGCATGCAGAACAAATAGGGCTGGCCAGAGGGTGTTGCCAAATGGCCAGGTTTGGAAACCTCATTTGTTACTTTTATCATTTGCGTCAAAAATTCTGTCCGAAGCGAATGCTCTTCTTAAGTTACAAGATGGTCCACCTGGAAAGCCTTATACAGCTCGATCAAGACCACCTCCACTGCCTTTTTTGTTGTCATCCCTTCTCCAGTCTAGGCCGCAATTAAAGTTACCAGATGAACAGTTTGGTGATGAGGACAGTCCTGATGATGACCTTGACGAATCATCAGATTCTGATGATGAGACTGAACTTGATGATTTGCCACCATTTAAACCTCTAACAAAGGCCCAGGTGCAAAAGTTGTCCAAAGCTCAGAAGAACGCATATTTTGATGAGCTAGAGTACAGAGAAAAACTTTTGATGAAGAAACAATTGAAGGAAGAAAGAAAGCGACGGAGGATAATGAAGAAAATAGCAGAATCAGCAAAAGCTCTGCCAAGTGACTATAGTGAAAATGTGGACGAAGAAAGTGGCGGTGCGGCTTCTGTTCCTGTTCCAATGCCAGATTTGTCCTTGCCTGCTTCTTTTGATTCAGATAATCCCACTCACAGGTATCGTTATCTTGATTCATCAAATCAGTGGCTTGTGAGGCCTGTCCTAGAAACTCATGGATGGGATCATGATGTGGGTTACGAAGGGTTAAATGTAGAAAGATTGTTTGTAGTCAAAGACAAGATACCCCTGTCCTTTTCTGGACAGGTTACAAAGGATAAAAAAGATGCTAATGTTCAAATGGAAATAGCCAGTTCAATTAAACATGGGGAAGGGAAAGCCACTTCATTAGGTTTTGATATGCAGACTGTTGGAAAGGACTTAGCTTATACATTACGCAGTGAGACAAGATTCAGTAATTTTAGAAGAAATAAGACAGCTGCTGGTCTCTCATTCACTCTCCTTGGTGATGCCTTATCAGCTGGATTGAAGATTGAAGACAAATTGGTTGCTAGTAACCGATTCAAGCTCGTTTTTAGTGGCGGTGCAATGACAGGGCGTGGAGATGTTGCTTATGGTGGCAGTTTAGAGGCCCAATTGAGAGATAAGGATTATCCTCTCGGACGGTCGCTATCAACACTTGGGCTCTCGGTTATGGATTGGCATGGAGATCTTGCCATCGGATGCAATGTACAATCACAGATCCCAGTTGGACGACATTCAAATCTTGTTGCACGTGCCAATTTGAACAATCGAGGGGCAGGGCAAATCAGCATTCGACTAAATAGTTCGGAACAGCTTCAAATTGCTTTGATTGGTCTCATCCCTTTAATAAAGAAGTTAGTTCTATATCATCAACAAGCGCAGTTTGGACAATGA 3690 0.4393 MDYRVDALDDESKRVGDGDSENLKDLGGEEVFEEAMEPQDHFHDQGSTLDLPDVDVDKCDETDTVSPLASALVDETLHVTLETDNFEEAIDVVAGESEKQTEGEPEVIAAESEKHIEGEAEIIAGESEKQTELIADQELERDGQRLDNVHLDGVDSGGTGDGQLSGDSCGMQDDNFNSSDLSGGKEESGLSSDGGLVATEKGATEEGNSGLLSENSEIDDSKFLTPRENGAAVLENGSTDKVDYVVTESNLESESNEVVVNQGTIAEDLKDGDPVPEFRDHKIEEVHDISADSNNDLKRQGEVISDMKDGTPGTDFSNEDRNDRDISITDTKITEPIDIEYEDAKAGSDSEKPEAIGEIRTSPDLHETVEEREEMLPAVNSLPPENSADEIPSVQASAADPKEGSNKDAQSHVSEEIHRDRDNSSVAEEPEKIQEKNLEVKETTQVTKELKIQPANKLPSASENSASAVPPPVRPAGLGHAAPLLEPASRGVQQSRANGAVANTQSQQVDDSSNGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQDPLDFSCTIMVLGKTGVGKSSTINSIFDEVKFNTSAFHMETNKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRSNEKILHSVKRFIKKTPPDIVLYLDRLDMQSRDFSDMPLLDTITDIFGPSIWFNAIVVLTHAASAPPDGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILSEANALLKLQDGPPGKPYTARSRPPPLPFLLSSLLQSRPQLKLPDEQFGDEDSPDDDLDESSDSDDETELDDLPPFKPLTKAQVQKLSKAQKNAYFDELEYREKLLMKKQLKEERKRRRIMKKIAESAKALPSDYSENVDEESGGAASVPVPMPDLSLPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVKDKIPLSFSGQVTKDKKDANVQMEIASSIKHGEGKATSLGFDMQTVGKDLAYTLRSETRFSNFRRNKTAAGLSFTLLGDALSAGLKIEDKLVASNRFKLVFSGGAMTGRGDVAYGGSLEAQLRDKDYPLGRSLSTLGLSVMDWHGDLAIGCNVQSQIPVGRHSNLVARANLNNRGAGQISIRLNSSEQLQIALIGLIPLIKKLVLYHQQAQFGQ* 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1837 1229 CDD Toc34_like 570 815 - -
Lan8g1837 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 592 732 IPR027417 -
Lan8g1837 1229 TIGRFAM 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains 474 1221 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Lan8g1837 1229 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 387 1224 IPR045058 -
Lan8g1837 1229 MobiDBLite consensus disorder prediction 851 891 - -
Lan8g1837 1229 MobiDBLite consensus disorder prediction 856 877 - -
Lan8g1837 1229 Pfam Translocase of chloroplast 159/132, membrane anchor domain 956 1219 IPR024283 -
Lan8g1837 1229 MobiDBLite consensus disorder prediction 139 236 - -
Lan8g1837 1229 MobiDBLite consensus disorder prediction 491 513 - -
Lan8g1837 1229 MobiDBLite consensus disorder prediction 285 305 - -
Lan8g1837 1229 Gene3D - 567 815 IPR027417 -
Lan8g1837 1229 MobiDBLite consensus disorder prediction 1 24 - -
Lan8g1837 1229 PANTHER TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-LIKE 387 1224 - -
Lan8g1837 1229 MobiDBLite consensus disorder prediction 161 186 - -
Lan8g1837 1229 MobiDBLite consensus disorder prediction 285 521 - -
Lan8g1837 1229 MobiDBLite consensus disorder prediction 447 467 - -
Lan8g1837 1229 MobiDBLite consensus disorder prediction 940 959 - -
Lan8g1837 1229 Pfam AIG1 family 598 731 IPR006703 GO:0005525
Lan8g1837 1229 MobiDBLite consensus disorder prediction 405 446 - -
Lan8g1837 1229 MobiDBLite consensus disorder prediction 313 374 - -
Lan8g1837 1229 ProSiteProfiles AIG1-type G domain profile. 595 824 IPR006703 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1837 Lan-Chr8 24765775 24770273 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1837 - - lang:109355509 2288.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1837 8 24765775 24770273 Lan13g0165 13 997176 1001807 LSH