LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan8g1815	ATGGGGGCTATTGGTGGAGAAGAGTTGGTAAAATGGGAGAAAATGCAAGGAATGAGTAATCGTGAAGAGAAGATTGTTGTGTTAATAAGGCTTAGACCAATAAGTGAGAAGGAAAATGCTGCAAATAAATCAGCAGATTGGGAATGCATTAATGATACTACCATCTTGTATCGGAACACATTGCGGGAGGGTTCCACATTTCCAAGTGCCTACACATTTGACAGAGTATTTCGAGGTGATTGTGCCACAAGGCAGGTATATGAGGAAGGAGCCAGAGAAATTGCACTTTCAGTTGTTAACGGAATTAACTCAACTATTTTTGCATACGGGCAAACAAGTAGTGGAAAGACATATACGATGATTGGAATAACCGAATATGCCGTAGCAGATATTTTTGAGTATATAAATAGGCATGAAGAAAGAGCATTTGTGTTGAAGTTCTCAGCAATTGAAATTTACAATGAAATTGTTAGAGACCTCCTCAGCACTGACAACTCTCCTCTCAGGCTGCGTGATGATCCAGAGAGAGGACCCATTTTAGAGAAACTTACAGAGGAGACCCTACAGGATTGGGGACATTTGGAAGGGCTTTTAGCTTTCTGTGAAGCACAAAGACAGGTAGGAGAGACGAACCTGAATGAAAAGAGTTCTAGATCTCACCAAATTATCAGATTGACAATAGAAAGTTCTGCCAGGGAATTCTTGGGCAAAGGAAACTCAGCTACCTTATCAGCTAGTGTGAATTTTGTTGATTTGGCTGGGAGTGAGCGTGCATCCCAGGTATCATCAGCTGGGGTGAGACTGAAAGAAGGTTGTCATATAAATCGGAGTTTACTTACTCTTTCAACGGTCATTCGTAAGCTTAGTAAGGGAAGACAGGGACACATCAATTACAGAGATTCTAAGTTGACACGCATACTGCAGCCTTGCTTAGGTGGAAATGCTAGAACGGCAATTATTTGCACTTTGAGCCCGGCTCGAAGCCATGTTGAGCAAACTAGAAACACACTTCTTTTTGCATGTTGTGCAAAAGAAGTGACCACCAAAGCACAGGTTAATGTAGTGATGTCTGATAAGGCCTTGGTCAAGCAGTTGCAAAAGGAGGTTGCCAGATTGGAAAGTGAGTTGAGAGCACCTGCTCCTCCTACCTCCAATGGTGATTATGCTGCAGCATTGTTGAGAAAGAAAGATCTCCAGATAGAAAAGATGGAGAAGGAGATTAAGGAGCTAATTAAGCAACGTAATCTTGCTCAATCAAGGATTGAGGAATTGCTACATATGGTTGAAAAGGATCAAATGTCTATAAAAGATGGGGATATCTGCGAAGATGGTGATTTACTGTCAGAGTCATCAAGCATTTTTGGTCCTCCTCGTCCTGATGAACACCCCGATCACTACTGCAAGGAAGTTCGATGTGTTGAGTTGGAGGAGTCAAGTAGAGGGAACTTAGAATATCTTGATCAATCGGCAAGTGGCAACACGGAGTTGGCATTACCCATTTCTGGAGAGGTAAATGGATCAAGTCAGGAAATATCTACTGGTTCAAATGACAATAGGGGAGAGAGTCAGGTCCAAGTCAAGTCAGCATATGGTATGCTGGAGCAGAGACTTCATGATGTACAAACGACCATTGGTTCTCTTGTACATCCTCACCCTGATGAACAATCTCCACAGTCCATGTCAGGAAATATGTCAAACTTTAGGAATTCTATATTAACTAGGAGCTGGAGCTGTACTGAATATCATATGACTGACTCTCCGGAGAGGACTCCAGCTAACGGATTTCAAAAAGGATTCCTTGGAAGACCAGATGGTTTGCGGAGAAAGTTGCCCCTATTAAGTTATGGTAGTTCCACAAGATTGTCAAGGAATGTTTCTCCGTCCTCTACTGGAAGTCCTTCAGCAGATGACTTTAGCGCCAACATCAGTATGAGAACATCTGCTAATGAGGATATTACTAGCATCCAAACTTTTGTTGCTGGGATGAAGGAAATGGTCAAACTCGAGTATAAGAAGCAGCTGGTTGATGGTCAGGATCAAGAGACAGATGGAAAACAATATAATTTTGAGAAGTATGTGAAAGATGTAGGTGTGGATCCAATGTTGCTGGCACCTGGAACTCCATTAGATTGGTCTCTGCAGTTCAAGAGACTGCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTATGTACCATTGACCCACAGGACCTACTTCTTTCTTTTGTTCTCGGGTGATCCAGCAGACTCCATTTACCTGGAGGTAGAGCATAGAAGACTTTCTTTCCTCAAAGGAACATTTTCTGAGGGAAACCTGTCTGAGAAGGATGGTCTAATCACGCTAGCTTCAAGTGCGAAGGCTCTTCGACGAGAGAGAGAACTGCTTGTCAAGCTTATGCAGAAGAGGCTTTCCGAGGAAGAGAGAAATGGTCTATTCAAGGAGTGGAGCATTGTATTGAATTCAAAGCGGAGGAAGATGCAACTGGCAAATCATTTATGGAGCAACACTGATATGAAGCACATAATGAATAGTGCAGAAGTAGTTGCGAAGTTGGTAAGGTTTTCAGAGCAGGGTAAAGCCCTGAAGGAGATGTTCGGGCTTAGCTTCACACCCAGACTCGCACGAAGGAGTTCCTTTTCATGGAAAAATAGCAGAGTATCTCTTTTATAG	2670	0.4255	MGAIGGEELVKWEKMQGMSNREEKIVVLIRLRPISEKENAANKSADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCATRQVYEEGAREIALSVVNGINSTIFAYGQTSSGKTYTMIGITEYAVADIFEYINRHEERAFVLKFSAIEIYNEIVRDLLSTDNSPLRLRDDPERGPILEKLTEETLQDWGHLEGLLAFCEAQRQVGETNLNEKSSRSHQIIRLTIESSAREFLGKGNSATLSASVNFVDLAGSERASQVSSAGVRLKEGCHINRSLLTLSTVIRKLSKGRQGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKEVARLESELRAPAPPTSNGDYAAALLRKKDLQIEKMEKEIKELIKQRNLAQSRIEELLHMVEKDQMSIKDGDICEDGDLLSESSSIFGPPRPDEHPDHYCKEVRCVELEESSRGNLEYLDQSASGNTELALPISGEVNGSSQEISTGSNDNRGESQVQVKSAYGMLEQRLHDVQTTIGSLVHPHPDEQSPQSMSGNMSNFRNSILTRSWSCTEYHMTDSPERTPANGFQKGFLGRPDGLRRKLPLLSYGSSTRLSRNVSPSSTGSPSADDFSANISMRTSANEDITSIQTFVAGMKEMVKLEYKKQLVDGQDQETDGKQYNFEKYVKDVGVDPMLLAPGTPLDWSLQFKRLQKEIIELWQSCYVPLTHRTYFFLLFSGDPADSIYLEVEHRRLSFLKGTFSEGNLSEKDGLITLASSAKALRRERELLVKLMQKRLSEEERNGLFKEWSIVLNSKRRKMQLANHLWSNTDMKHIMNSAEVVAKLVRFSEQGKALKEMFGLSFTPRLARRSSFSWKNSRVSLL*	890

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan8g1815	889	ProSiteProfiles	Kinesin motor domain profile.	24	346	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lan8g1815	889	Pfam	Domain of unknown function (DUF3490)	714	872	IPR021881	-
	Lan8g1815	889	Coils	Coil	393	427	-	-
	Lan8g1815	889	MobiDBLite	consensus disorder prediction	618	638	-	-
	Lan8g1815	889	Coils	Coil	355	375	-	-
	Lan8g1815	889	PANTHER	KINESIN-LIKE PROTEIN KIN-7F	6	889	-	-
	Lan8g1815	889	PRINTS	Kinesin heavy chain signature	101	122	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lan8g1815	889	PRINTS	Kinesin heavy chain signature	210	227	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lan8g1815	889	PRINTS	Kinesin heavy chain signature	246	264	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lan8g1815	889	PRINTS	Kinesin heavy chain signature	296	317	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lan8g1815	889	CDD	KISc_CENP_E	24	346	-	-
	Lan8g1815	889	PANTHER	CENTROMERE PROTEIN E	6	889	-	-
	Lan8g1815	889	Pfam	Kinesin motor domain	30	346	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lan8g1815	889	SMART	kinesin_4	22	354	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lan8g1815	889	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	24	377	IPR027417	-
	Lan8g1815	889	ProSitePatterns	Kinesin motor domain signature.	245	256	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
	Lan8g1815	889	Gene3D	Kinesin motor domain	15	377	IPR036961	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan8g1815	Lan-Chr8	24625181	24631522	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan8g1815	22	376	Miscellaneous Gene Families	AT5G06670	42.105	3.61e-78	267

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan8g1815	K11498		-	gmx:100820012	1271.91

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan7g0124	7	738775	745829	Lan8g1815	8	24625181	24631522	LSH