LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan8g1795	ATGGAGTCTGCTTGTGTGACATTGAAAGCAAATACCCATTTTGCAAACTCAAGAAAAGGCCATACTTTTGGTCAAGATAATGGCTTTTTAGGTGAAAGAATCAAAGGAGGCTTTAATTATAGTCCCTGGGTTAATAATGCCAAACCTGGTCTCATACGTGCTGTTTTTACATCAAACAATGCCAAAGAATCTGTGTCCTTTCAAGTGCCAACTTTTCTCAGAAGAAAAGCTGACCCCAAAAATGTTGTTTCCATCATATTGGGAGGAGGTCCTGGGACTCAACTTTTTCCTCTTACCAAAAGAGCTGCTACACCTGCTGTCCCTGTTGGTGGCTGCTATAGGCTTATAGACATTCCAATGAGCAATTGCATCAACAGTGGCCTCAACAAAATATTTGTACTCACTCAGTTCAATTCTGCATCCCTGAACCGTCACATTTCCCGCGCCTATTTCGGAAATGGCATCAACTTTGGGGATGGATATGTGGAGGTTCTGGCGGCTACTCAAACACCAGGAGAAGCTGGAAAGAATTGGTTCCAAGGAACTGCAGATGCTGTGAGGCAGTTTACATGGGTATTTGAGGATGCTAAGCACACAAACGTTGAGAATGTATTGATCTTGGCCGGAGACCATCTATATCGAATGGATTACATGGACCTTGTGCAGAGTCATGTTGACAGAAATGCAGATATCACAGTTTCATGTGCTGCTGTAGGTGACAGCCGTGCATCAGATTATGGATTGGTGAGTGTAGATGGTAGAGGTCGCATCATCAATTTCTCAGAGAAACCAAAGGGTGAGGGTCTGAAAGCAATGCAGCAAGCAGATACCTCTCTTTTCGGGTTGTCACCCCAAGAGGCATTAAAATCACCATATATTGCATCTATGGGAGTTTATGTATTCAAGACAGAAGTTTTACTGAATCTTCTAAAATGGAGATATCCTACATCCAATGACTTTGGATCTGAAATCATTCCTGCAGCTGTGAGGGAACACAATGTCCAAGCCTATTTTTTCAGAGACTATTGGGAAGACATTGGAACAATAAAAACCTTTTACGATGCTAACTTGGCTCTTACTGAAGAGAGTCCAATGTTCAAATTTTATGATCCCAAGACACCCATCTTCACATCTCCGAGATTCCTACCACCAACAAAGATTGATAAATGCAGGGTTGTGGATGCAATAATCTCTCATGGATGTTTCCTTCGGGAATGTACTGTCCAACATTCCATTGTTGGTGAACGTTCTCGTTTGGATTATGGTGTCGAGCTTCAGGACACTGTAATGATGGGAGCAGACTATTACCAAACTGAATCTGAAATAGCTTCTCTTCTAGCAGATGGGAAGGTTCCCATTGGGATTGGAAGTAACACCAAGATAAAGAACTGCATAATTGACAAGAATGCTAAGATTGGGAAAAATGTCATCATCATGAACAAAGATGGTGTTCAAGAAGCAGATAGAGCAGATGATGGATTTTACATTCGATCAGGAATCACCATCATAATGGAGAAGGCAGCAATAGAAGATGGCACTGTCATATAA	1548	0.4173	MESACVTLKANTHFANSRKGHTFGQDNGFLGERIKGGFNYSPWVNNAKPGLIRAVFTSNNAKESVSFQVPTFLRRKADPKNVVSIILGGGPGTQLFPLTKRAATPAVPVGGCYRLIDIPMSNCINSGLNKIFVLTQFNSASLNRHISRAYFGNGINFGDGYVEVLAATQTPGEAGKNWFQGTADAVRQFTWVFEDAKHTNVENVLILAGDHLYRMDYMDLVQSHVDRNADITVSCAAVGDSRASDYGLVSVDGRGRIINFSEKPKGEGLKAMQQADTSLFGLSPQEALKSPYIASMGVYVFKTEVLLNLLKWRYPTSNDFGSEIIPAAVREHNVQAYFFRDYWEDIGTIKTFYDANLALTEESPMFKFYDPKTPIFTSPRFLPPTKIDKCRVVDAIISHGCFLRECTVQHSIVGERSRLDYGVELQDTVMMGADYYQTESEIASLLADGKVPIGIGSNTKIKNCIIDKNAKIGKNVIIMNKDGVQEADRADDGFYIRSGITIIMEKAAIEDGTVI*	516

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan8g1795	515	Gene3D	Hexapeptide repeat proteins	381	515	-	-
	Lan8g1795	515	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE	1	515	-	-
	Lan8g1795	515	CDD	ADP_Glucose_PP	85	346	-	-
	Lan8g1795	515	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	68	380	IPR029044	-
	Lan8g1795	515	ProSitePatterns	ADP-glucose pyrophosphorylase signature 1.	88	107	IPR005836	GO:0005978\|GO:0008878
	Lan8g1795	515	SUPERFAMILY	Trimeric LpxA-like enzymes	377	515	IPR011004	-
	Lan8g1795	515	ProSitePatterns	ADP-glucose pyrophosphorylase signature 3.	294	304	IPR005836	GO:0005978\|GO:0008878
	Lan8g1795	515	ProSitePatterns	ADP-glucose pyrophosphorylase signature 2.	178	186	IPR005836	GO:0005978\|GO:0008878
	Lan8g1795	515	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	80	476	IPR029044	-
	Lan8g1795	515	TIGRFAM	glgC: glucose-1-phosphate adenylyltransferase	82	479	IPR011831	GO:0005978\|GO:0008878
	Lan8g1795	515	Pfam	Nucleotidyl transferase	84	361	IPR005835	GO:0009058\|GO:0016779
	Lan8g1795	515	CDD	LbH_G1P_AT_C	383	509	-	-
	Lan8g1795	515	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	1	515	IPR011831	GO:0005978\|GO:0008878

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan8g1795	Lan-Chr8	24509832	24514758	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan8g1795	K00975		-	gmx:100808791	925.62

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan7g0144	7	875181	879681	Lan8g1795	8	24509832	24514758	LSH