Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1792 ATGGAAGGAACTGGAGGCAGCAGTGCCTCAGCTGCTGCACCCGTGAACCAATGGTTGCTGGAATTTTCGAGGCGATTTCAGTATTATCTTGATAAATCGACCCCACACGCTACGTATAGATGGATCGGGACTGTGGTTATTGCCTCAATCTATATTTTGAGGGTTTTTTATATCCAGGGATTTTACATTGTGTCCTATGGTCTGGGAATTTACCTGCTGAACCTGTTGATTGGGTTTCTGTCACCCTTGGTTGATCCTGAGCTGGAACCTTCTGATGGTCCTATGCTTCCAACTAAAGGTTCTGATGAGTTCAAACCATTCATCCGCCGACTTCCTGAATTCAAATTCTGGTATTCTTTCACAAAGGCCTTATGCATAGCATTTGTGATGACTTTCTTTTCCGTATTTGATGTTCCTGTCTTCTGGCCTATATTACTCTGTTACTGGATCGTTCTGTTTGTCCTTACAATGAGGCGCCAAATTGCACACATGATCAAATACAGATACATTCCATTCAACCTTGGAAAGCAGAAGTATGGTGGCAAGAGATCTTCTGCAAGTAGCAGTGGCGCTCGTGCAGACTGA 585 0.4393 MEGTGGSSASAAAPVNQWLLEFSRRFQYYLDKSTPHATYRWIGTVVIASIYILRVFYIQGFYIVSYGLGIYLLNLLIGFLSPLVDPELEPSDGPMLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNLGKQKYGGKRSSASSSGARAD* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1792 194 PANTHER PROTEIN RER1 1 189 IPR004932 GO:0016021
Lan8g1792 194 Pfam Rer1 family 19 180 IPR004932 GO:0016021
Lan8g1792 194 PANTHER PROTEIN RER1A 1 189 - -
Lan8g1792 194 PIRSF AtER_Rer1p 1 190 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1792 Lan-Chr8 24497246 24500140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1792 1 194 Miscellaneous Gene Families AT2G21600 76.923 3.84e-110 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1792 - - gmx:100817031 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1792 8 24497246 24500140 Lan13g0230 13 1420588 1423287 LSH