Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1775 ATGATGTTACTGTCGCTCTCACCTGTTTCTCATTTTGGCGTTAGTTTGAACTCCTCAACATACTCCTCCTTCTCACTTCTTTCTCCGCTACGTATTCATCCCCTTCGTTCCTCTCCGGAAAGAACCATTGCATTGCCAGCTTTTGAATCAATCACTGATGACACACCAGAATTGCCTCCTCTAGTTCGAGCATTAAAAGCCTCAGCTGAAGAAAATGCTGCCACTTTTCACTTTCCTGGACATAACAGAGGCCATGCTGCTCCACCTTCATTCACTCGCCTAATTGGAATTCGACCGTATATTCATGATTTGCCCGAGCTTCCGGAACTTGACAACCTCTTTTGTCCCCAAGGGCCTATATTAGAAGCACAAACAGAAGCAGCCAAACTGTTTGGTGCCTCGCAGACATGGTTTCTTGTTGGAGGTACTACTTGTGGAATCCAGGCAGCAATAATGGCAACTTGTTCACCGGGACAATTTCTGATTCTTCCTAGGAATTGTCATATATCCGCTATATCGGCTATGGTATTATCTGGTGCAGTGCCGAAGTATATCGTTCCTGATTATAAGAATGATTGGGACATTGCTGCTGGTGTTAGTTCATCGCAGGTTTTGAAAGCTATGCAGGAACTCGAAAGGGAAGGTAAAAAAGCAGCAGCAGTGTTCATTACCTCACCTACTTATCATGGTATTTGCAGCAACTTGAGAGAGATTTCCGAGTTGTGTCATTCTCGTAAAATTCCTTTCATCGTTGATGAAGCACATGGTGGACATCTTGGATTCCATTCTGAATTTCCTAACTCGGCCCTTCAGCAAGGAGCTGATCTGACTGTACAGTCCACTCACAAAGTTCTGTGCTCTCTTACTCAGTCATCTATGTTACACATGTCAGGCAATACTGTGGATAAGGAAAAGATTTCGAGATGTCTACAAACTCTTCAAACCACAAGCCCTAGTTATCTGCTTTTGGCATCCCTGGATGCTGCTAGAGCTCAACTTAGTGAAAGCCCTGATATTGTTTTCAACCAAGCGATCAAATTAGCCTATGAAGCTAGGTGCATGCTAAAGCGCATTCCGGGTATATCAGTGCTTGAGAGTTCAAGCTTCCCAACCTCTCCCGCAATTGATCCATTGCGGCTTACTGTAGGTTTTTGGCAGCTTGGTCTATCAGGTTATGAAGCAGATGAAATCTTATATAGGGATTATGGAATTGTCTGTGAACTTGTTGGGAGTAAATCTATTACTTATGCCCTTAATCTTGGAACTTGTAGGGATCACATCCAAAGGCTTTTATTGGGAATAAAGAATGTAGCCAGAACACATGCATATATTCAGCAACCTGAAGAGAGACTGCATACTAAGCATGCACCCTTTGATGATATAATGATGAGTTTAATCCCAAGAGATGCTTTCTTTGCAAGTAAAAGGAAGGTAACAACAATGGAGAGCATCGGTGAGGTTTCCGGGGAGCTTATATGCCCATACCCACCTGGCATTCCAGTATTGATACCCGGTGAGGTTATTACTAAAGAAGCTATTGACTATCTGCTCCATGTTAGAGGCGAAGGAGCTGATATAAGTGGAGCCTCTGACCCATCACTTTCTTCTATAGTTGTATGCAATGTATAG 1629 0.4322 MMLLSLSPVSHFGVSLNSSTYSSFSLLSPLRIHPLRSSPERTIALPAFESITDDTPELPPLVRALKASAEENAATFHFPGHNRGHAAPPSFTRLIGIRPYIHDLPELPELDNLFCPQGPILEAQTEAAKLFGASQTWFLVGGTTCGIQAAIMATCSPGQFLILPRNCHISAISAMVLSGAVPKYIVPDYKNDWDIAAGVSSSQVLKAMQELEREGKKAAAVFITSPTYHGICSNLREISELCHSRKIPFIVDEAHGGHLGFHSEFPNSALQQGADLTVQSTHKVLCSLTQSSMLHMSGNTVDKEKISRCLQTLQTTSPSYLLLASLDAARAQLSESPDIVFNQAIKLAYEARCMLKRIPGISVLESSSFPTSPAIDPLRLTVGFWQLGLSGYEADEILYRDYGIVCELVGSKSITYALNLGTCRDHIQRLLLGIKNVARTHAYIQQPEERLHTKHAPFDDIMMSLIPRDAFFASKRKVTTMESIGEVSGELICPYPPGIPVLIPGEVITKEAIDYLLHVRGEGADISGASDPSLSSIVVCNV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1775 542 Pfam Orn/Lys/Arg decarboxylase, major domain 59 363 IPR000310 GO:0003824
Lan8g1775 542 PANTHER ARGININE DECARBOXYLASE 57 541 - -
Lan8g1775 542 Gene3D - 440 539 - -
Lan8g1775 542 SUPERFAMILY Ornithine decarboxylase C-terminal domain 397 540 IPR036633 GO:0003824
Lan8g1775 542 SUPERFAMILY PLP-dependent transferases 59 440 IPR015424 -
Lan8g1775 542 Gene3D - 59 338 IPR015421 GO:0003824
Lan8g1775 542 CDD Orn_deC_like 60 352 IPR000310 GO:0003824
Lan8g1775 542 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 460 520 IPR008286 GO:0003824
Lan8g1775 542 PANTHER ARGININE DECARBOXYLASE 57 541 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1775 - - gmx:100819143 855.129