Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1759 ATGGCATTGGTTTTCAACGTGATTCATCTTCTGCTGGTGTTGCCTCTTATTATTGTTACTCATGTAGAGGCTCTTGCAGGGAAATCCTTACCAACTGATATTCAAGGAAGAAAAACTCTTGCTCAAGAAAAACCATATACTCCTTCTATTATAGACATTTCTGAGCTTAATAGAACCAGTTTCCCTCAAGGTTTCATTTTCGGGACAGCATCAGCATCATACCAATACGAAGGTGCTGCAGCGGAAGGTGGCAAAGGACCAAGCATATGGGACACTTACACTCACAAATACCCAGAAAAAATAGCTGATAGAAGCACTGGAGATGTAGCCGACGACCAATATCACCGTTACAAGGAGGATGTTGGAATCATGAAGTATATGAATTTGGATGCATATAGATTCTCCATTTCTTGGTCTAGAGTCCTACCAAAAGGAAAGCTTAGTGGAGGTGTAAACAAAGAAGGAATAAACTACTATAACAACCTCATCAACGAGCTAATTGCCAATGGTATACAACCATTTGTGACCCTTTATCATTGGGACCTTCCACAAGCCTTAGAGGATGAGTATCAAGGATTGTTAAGCCCTCTCGTTGTAAATGATTTCAGGGACTATGCTGATCTATGCTTCAAGGAATTTGGTGATAGGGTGAAACATTGGATTACATTTAATGAACCAAGTAGTGTAAGCCAGCAAGCTTATTCAGTTGGCTCTTCTGCACCAGGTCGGTGTTCTGCTTGGTTAAAAAGAAATTGCACTGGTGGCAATTCAGGGACAGAACCATATATTACTTCACATAACCAACTTCTTTCTCATGCTGCTGCTGCCAATTTGTATAAGACCAAGTACAAGGAATCTCAAAAGGGTTTAGTAGGGATTACCTTAAATACTTATTGGTTTATGCCATTGACTGATCAAAAATCAAGCCAGGATGCTGCACAGAGAGCCCTTGACTTCATGTTTGGATGGTATATGGATCCACTAACAAAAGGTGAGTATCCAAAAAGCATGCAAACTTTGGTAGGAAACCGGCTACCCAAGTTCACAGCAGAACAAGCACAACAACTTAAGGGATCATTGGACTTTTTAGGCCTAAACTACTACTCATCAGTCTATGCTGCCAACTCACCTCCAGTGCCTACTCCCGGACCAACCCTAGAAACCGATCCTCGTCTTATTTTATCAGTTGATCGTGATGGCAAACCCCTTGGCCCAACTGCTGCTTCGTCCTGGTTAATTATTTACCCAAAAGGACTTCAAGAGCTATTGCTCTATATCAAGAACCGTTACAACAACACCTTAGTTTACATTACTGAAAATGGATGTGATGAGTACGATGATCCAAAGCTATCACTTGATGAATCCCTCGTAGATACTTACAGATTTGATTATCTTTATCGTCATCTTTATTATCTTAAAAATGCAATCAAGGATGGTGTGAATGTGAAGGGATATTTTCATTGGTCATTGTTGGATAACATGGAATGGAGCTCTGGTTACACCGTGCGATTTGGACTAGTCTTTGTGGATTATAAAAATGGTTTGAAAAGATACCCAAAACTCTCAGCACAATGGTTCAAGAAATTCCTCAATAAATCTTAG 1602 0.402 MALVFNVIHLLLVLPLIIVTHVEALAGKSLPTDIQGRKTLAQEKPYTPSIIDISELNRTSFPQGFIFGTASASYQYEGAAAEGGKGPSIWDTYTHKYPEKIADRSTGDVADDQYHRYKEDVGIMKYMNLDAYRFSISWSRVLPKGKLSGGVNKEGINYYNNLINELIANGIQPFVTLYHWDLPQALEDEYQGLLSPLVVNDFRDYADLCFKEFGDRVKHWITFNEPSSVSQQAYSVGSSAPGRCSAWLKRNCTGGNSGTEPYITSHNQLLSHAAAANLYKTKYKESQKGLVGITLNTYWFMPLTDQKSSQDAAQRALDFMFGWYMDPLTKGEYPKSMQTLVGNRLPKFTAEQAQQLKGSLDFLGLNYYSSVYAANSPPVPTPGPTLETDPRLILSVDRDGKPLGPTAASSWLIIYPKGLQELLLYIKNRYNNTLVYITENGCDEYDDPKLSLDESLVDTYRFDYLYRHLYYLKNAIKDGVNVKGYFHWSLLDNMEWSSGYTVRFGLVFVDYKNGLKRYPKLSAQWFKKFLNKS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1759 533 Gene3D Glycosidases 44 533 - -
Lan8g1759 533 Pfam Glycosyl hydrolase family 1 59 531 IPR001360 GO:0004553|GO:0005975
Lan8g1759 533 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 65 79 IPR033132 -
Lan8g1759 533 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 50 532 - -
Lan8g1759 533 SUPERFAMILY (Trans)glycosidases 50 531 IPR017853 -
Lan8g1759 533 PRINTS Glycosyl hydrolase family 1 signature 359 373 IPR001360 GO:0004553|GO:0005975
Lan8g1759 533 PRINTS Glycosyl hydrolase family 1 signature 435 443 IPR001360 GO:0004553|GO:0005975
Lan8g1759 533 PRINTS Glycosyl hydrolase family 1 signature 458 469 IPR001360 GO:0004553|GO:0005975
Lan8g1759 533 PRINTS Glycosyl hydrolase family 1 signature 479 496 IPR001360 GO:0004553|GO:0005975
Lan8g1759 533 PRINTS Glycosyl hydrolase family 1 signature 503 515 IPR001360 GO:0004553|GO:0005975
Lan8g1759 533 PANTHER GLYCOSYL HYDROLASE 50 532 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1759 Lan-Chr8 24249893 24254844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1759 34 532 Glycoside Hydrolase AT5G44640 53.600 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1759 - K01188 gmx:100801874 781.171