Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1758 ATGGGTATGCCATTTAATATTATCCTCCTTTGGGTCTTTACTCTTGTTATTACCTCATCCATTGCACTCATTGAAACTGTTATGCCTGTTCTTGTTGATGTTGCTTCTTTAAATCGGAGCAGTTTTCCAGAGGATTTCATTTTTGGAACTGCCTCCTCCTCCTACCAGTATGAAGGTGCTGCATATGAAGATGGCAAAGGACCAAGTATATGGGATACAAAAACTCATAAATACCCTGAAAAAATAGTGGATAGAAGCACGGGAGATGTGGCTGTTGATCAGTATCATCGCTATAAGGAAGATGTGAAAATCATGAAGTATATGAATACAGATGCGTACAGATTTTCCATTTCTTGGCCAAGGATATTACCAAAAGGAAAAATAAGTGGTGGCATAAACCAAAAAGGAATCGAGTATTACAACAACCTCATCGACGAGCTAATAGCTAATGGTCTGCAACCATTTGTTACCCTTTTCCATTGGGATCTTCCCCAAGCATTGCAAGATGAGTATGGTGGCTTCTTAAGCCCTCATATTATAAATGATTTTCAAGACTATGCAGAGCTATGTTTCAAGGAATTTGGAGATAGAGTTAAACATTGGATTACTATTAATGAGCCTTGGAGTTTTAGTGTGGGTAACCCTGGGCACTATGTTTCTTTACACTATCAACTACTTGCTCATGCAGCTGCTGTCAAAATTTATAAGACTAAGTATCAGGGGCCTCAAAAAGGTATCATAGGCATCACCTTAAATTCTAACTGGTTCTTGCCGTTCTCAGAGGATAGAGCAGATCATGTTGCTGTACAACGAGCTCTTGATTTCATGTTTGGTTGCTTAATGGAACCACTTACAAAAGGAAAGTATCCAAAATCAATGCGATCTTTATTGGGAAGCCAATTACAGAATTTCACTAAAGAGCAGTCCAATCTTGTTATTGGTTCCTTTGATTTTATTGGACTTAATTACTACACTGCTAATTACGCTTCCAATACATCTTACCCAAGTAATGACAATACCACACCAAGCTTTATCAAGGATTCTAATGTCAATTTTACATCTGAGCGTAACGGGAGACCCATTGGACAAAGGGCTGCATCAGATTGGCTATATGTTTATCCAAAGGGGATTTGGGAGCTATTATTGTACACAAAGAGAAAGTTCAAGAACCCTTTAATATACATCACTGAAAATGGTGTGGAGGAGTATAATGATCCAACATTATCTGTTGAGGAAGCACTCATGGATACTTATAGAATTGATTACTATTATCGGCATCTATATTATATTTTGGCTGCAATCAAGGATGGTGTGAAGGTAAAAGGGTATTTTGCATGGTCACTATTGGACAACTTTGAGTGGGTTTCTGGCTACAGTGTGCGTTTTGGAATTAACTTTGTTGATTACAATGATAATTTGAAAAGACACTCAAAGCTCTCTGCCCATTGGTTCAGGAATTTTCTTAAAAAAAAACAGAAGTCTGCAAAGCTCGCGGTTTTGTGTATGGAATAA 1512 0.3783 MGMPFNIILLWVFTLVITSSIALIETVMPVLVDVASLNRSSFPEDFIFGTASSSYQYEGAAYEDGKGPSIWDTKTHKYPEKIVDRSTGDVAVDQYHRYKEDVKIMKYMNTDAYRFSISWPRILPKGKISGGINQKGIEYYNNLIDELIANGLQPFVTLFHWDLPQALQDEYGGFLSPHIINDFQDYAELCFKEFGDRVKHWITINEPWSFSVGNPGHYVSLHYQLLAHAAAVKIYKTKYQGPQKGIIGITLNSNWFLPFSEDRADHVAVQRALDFMFGCLMEPLTKGKYPKSMRSLLGSQLQNFTKEQSNLVIGSFDFIGLNYYTANYASNTSYPSNDNTTPSFIKDSNVNFTSERNGRPIGQRAASDWLYVYPKGIWELLLYTKRKFKNPLIYITENGVEEYNDPTLSVEEALMDTYRIDYYYRHLYYILAAIKDGVKVKGYFAWSLLDNFEWVSGYSVRFGINFVDYNDNLKRHSKLSAHWFRNFLKKKQKSAKLAVLCME* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1758 503 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 46 60 IPR033132 -
Lan8g1758 503 SUPERFAMILY (Trans)glycosidases 27 489 IPR017853 -
Lan8g1758 503 Gene3D Glycosidases 25 490 - -
Lan8g1758 503 PANTHER GLYCOSYL HYDROLASE 7 491 IPR001360 GO:0004553|GO:0005975
Lan8g1758 503 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 7 491 - -
Lan8g1758 503 PRINTS Glycosyl hydrolase family 1 signature 315 329 IPR001360 GO:0004553|GO:0005975
Lan8g1758 503 PRINTS Glycosyl hydrolase family 1 signature 393 401 IPR001360 GO:0004553|GO:0005975
Lan8g1758 503 PRINTS Glycosyl hydrolase family 1 signature 416 427 IPR001360 GO:0004553|GO:0005975
Lan8g1758 503 PRINTS Glycosyl hydrolase family 1 signature 437 454 IPR001360 GO:0004553|GO:0005975
Lan8g1758 503 PRINTS Glycosyl hydrolase family 1 signature 461 473 IPR001360 GO:0004553|GO:0005975
Lan8g1758 503 Pfam Glycosyl hydrolase family 1 40 492 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1758 Lan-Chr8 24241091 24247976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1758 10 494 Glycoside Hydrolase AT5G44640 50.489 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1758 - K01188 gmx:100785608 746.503