Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1747 ATGACGATGATGTTGAGATGGAATTTGAATTTGAATTTGAATTTGATGCCAATGTTGTGTTGTATCAATTCATCTCACTCTTATTTCACATCTCTTCAACTTCAACAACAACCCTTTCGTCGTTTCCCAAGGTTCAAACTTTTCTCTCAACCATCTTTCTCTTCTGCAACTTCTTCACCATCTTTGGACACCTCATATCTCCGTTGTTCCATGCCACATAACCACAACCTCCGTCTTGCCGTTCTTATTAGCGGCGGTGTTGATAGCAGTGTTGCTCTCCGCCTTCTTCACGCCGCCGGTCACTCTTGCACCGCCTTCTACCTCAAAATTTGGTTCCAAGAAGATTTTGACAACTTTTGGTCACAGTGTCCATGGGAAGATGATTTGAAGTATGCCAAACATGTTTGTGATCAGGTTGATGTGCCATTAGAAGTTGTGCATTTGACTGATGAGTACTGGAACAATGTGGTTTCTTACATCATTGAAGAGTATCGTTGTGGCCGTACTCCTAACCCAGATGTTCTCTGCAATACGAGAATAAAGTTTGGTGCATTCTTGGATGCAATCAACAATATGGGTTTTGACTATGTTGCTTCTGGACATTATGCAAGGGTTGTCCACCCATCTTCAGATCAAATGGATGAGCCTTCTGTTCTAGAACTATCACAAGACATGGTGAAGGATCAAACATACTTCCTTTCACACCTCTCACAATCCCAGCTGAAACGACTTCTTTTTCCACTTGGTTGTATTCCCAAGGATGAAGTCCGTAGGCTTGCCTCAAAATTTGATCTTCCAAATAAGGATAGAAAGGATTCCCAAGGAATATGCTTTTTGGGCAAGATAAGGTTCAGTGACTTCGTTGCACGGCATATTGGGGAGAGAGAAGGTATCATCCTGGAAGCGGAGACTGGAGATTTTCTTGGCAAACATCGAGGCTTCTGGTTTTATACTATTGGTCAGCGCCAGGGTCTACGGCTACCTGGAGGCCCATGGTATGTTGTTGAGAAGGACATTAAAAATAATGTGGTTTTCGTGTCAAGAAATTACTTTTCCTTTGACAAAAGAAGGCGCATATTTCGTGTTGGCTCTTTTAAGTGGCTTAGTGGGCAGCCCCCAAGCCAGACAACTCAGATCCAATGCAAGGTGAGACATGGTCCTGGGTTCTATAATTGTAGCTTAGAGATGGAAGATGGAGGAGATGGCATTGGAGACTCTGCTGTTGTTCGCATATCTGAAGATGATCAAGGCCTAGCTGCCGGGCAGTTTGCAGCCTTCTACGAGGGAAGAACATGTATAGGCTCTGGTGTGATTTTGGAGTCCTGGGACGATCAAAGTTTTCCTGTATGTACAAAAGCGTTGGAAATTGCAAAAATGGAAGATAAATCGAAGCTTGGGAATCCAGTTAAGATAAAAGTTAAACCAGACAGCCCACAGGAGGTTCGCAGTTCCACAGAGGTAGCAAGCAAAGCATCATAA 1479 0.4341 MTMMLRWNLNLNLNLMPMLCCINSSHSYFTSLQLQQQPFRRFPRFKLFSQPSFSSATSSPSLDTSYLRCSMPHNHNLRLAVLISGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFDNFWSQCPWEDDLKYAKHVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFLDAINNMGFDYVASGHYARVVHPSSDQMDEPSVLELSQDMVKDQTYFLSHLSQSQLKRLLFPLGCIPKDEVRRLASKFDLPNKDRKDSQGICFLGKIRFSDFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDIKNNVVFVSRNYFSFDKRRRIFRVGSFKWLSGQPPSQTTQIQCKVRHGPGFYNCSLEMEDGGDGIGDSAVVRISEDDQGLAAGQFAAFYEGRTCIGSGVILESWDDQSFPVCTKALEIAKMEDKSKLGNPVKIKVKPDSPQEVRSSTEVASKAS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1747 492 Hamap tRNA-specific 2-thiouridylase MnmA [mnmA]. 77 439 IPR004506 GO:0008033|GO:0016740
Lan8g1747 492 MobiDBLite consensus disorder prediction 467 492 - -
Lan8g1747 492 CDD tRNA_Me_trans 78 438 IPR004506 GO:0008033|GO:0016740
Lan8g1747 492 Pfam tRNA methyl transferase PRC-barrel domain 286 348 IPR046884 -
Lan8g1747 492 PANTHER - 42 471 - -
Lan8g1747 492 Gene3D Translation factors 357 447 - -
Lan8g1747 492 Pfam tRNA methyl transferase HUP domain 78 281 - -
Lan8g1747 492 Pfam Aminomethyltransferase beta-barrel domain 358 438 IPR046885 -
Lan8g1747 492 Gene3D HUPs 64 290 IPR014729 -
Lan8g1747 492 TIGRFAM trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 79 438 IPR004506 GO:0008033|GO:0016740
Lan8g1747 492 Gene3D - 291 350 IPR023382 GO:0016783
Lan8g1747 492 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 79 323 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1747 K21027 - gmx:100785275 801.971