LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan8g1746	ATGGTGCATTATAACTTCAAGAAAATTACTGTGGTACCAAATGGGAAGGACTTCATTGATATCATCCTTTCTCGCACCCAGCGTCAGACACCTACAGTTGTACACAAAGGATATGCGATTACCCGTCTCCGTCAGTTTTATATGCGCAAAGTGAAATACACTCAACAGAACTTTCATGAAAAGCTCTCAACCATTGTTGATGAGTTCCCTCGGCTTGATGATATTCATCCTTTTTATGGTGATCTACTCCATGTACTATACAACAAAGATCATTACAAGCTTGCGCTCGGACAAATCAATACTGCTAGGAATCTTATTGGTAAGATTGCCAAGGATTATGTGAGATTGCTGAAATATGGTGACTCACTATACCGGTGCAAGTGTCTGAAGGTTGCTGCTCTTGGCCGCATGTGCACTGTGCTTAAGAGGATTGGCCCAAGTTTGGCTTACCTCGAGCAGATAAGACAACACATGGCTAGGCTTCCATCAATCGATCCAAATACCAGGACCGTCTTGATTTGTGGATATCCTAATGTTGGCAAGAGCTCATTCATTAACAAAATTACCAGAGCTGATGTGGATGTACAGCCTTATGCTTTCACTACAAAGTCACTCTTTGTAGGGCATACGGACTATAAGTACCTCAGGTACCAAGTTATTGATACCCCAGGGATTTTGGACAGACCTTTTGAAGATCGTAATATTATTGAGATGTGCAGTATCACTGCTCTGGCACATTTGAGAGCTGCAATATTGTTTTTCTTGGACATATCTGGGTCTTGTGGTTACACTATTGCACAACAGGCAGCTCTATTTCATAGCATTAAGTCTTTGTTCATGAACAAGCCATTAATTATTGTCTGCAACAAGACAGACTTGCAACCCCTTGAGGGCTTATCTGAGGAAGACATGAAATTGGTCATGGAGATGAAATCTGAAGCCTTGAAGACTGTTATTGGTCAAGACGGAGATATTACAAATGATGAGGGTGTGTTGTTGACCATGAGCACTTTGACAGAAGATGGGGTAATGGCAGTTAAAAATGCAGCATGTGAAAGGTTATTGAATCAGAGGGTAGAGATAAAGATGAAGTCAAAGAAAATTAATGATTGCTTGAATAGGTTTCATGTTGCATTACCAAAACCTCGTGACCAGAAGGAAAGGCTTCCATGTATTCCTCCAGCAGTTCTAGAAGCTAGGTCTAAGCAAGCAGCTGAGGAGGAAAAGAGGAAAACTGAAAAGGAGCTGGAGAATGAGAATGGAGGGGCAGGTGTATACTCGATGAACTTGAGAAAGCATTACATTTTAGCTGATGATGAATGGAAAGAAGATATACTGCCAGAAATTTTGGATGGTCACAATGTGTATGATTTCATTGATCCTGATATTCTGCATAGAGTTGAAGAGTTGGAAAGAGAAGATGGGTTTAGACAGGCAGAGGATGAAGATGATTTTGAGATAGATGGAACTGAATTAACTCCAGAACAACAGGCAGCTTTAGCTGAGATTAGGAAAAAGAAAAGCCTGCTCATTCAACAGCATCGGATCAAAAAGAGCACAGCAGAGAGCCGGCCAACTGTTCCAAGGAAATTTGACAAGGACAAACAATTCACATCAGAAAGAATGGGAAGGCAGCTATCATCTTTGGGGCTTGATCCCAGTTTGGCAATTAACAGAATGCGCAGCAGGTCTGTGTCTAGGAGAGGTCGGAAAAGGGATAGATCACCTGAAAGTGCTCATGGTGGAGATGGAATGGATATTGATGGTGACACACCTAGCAAGAAGCAGCGTCTCAGTAGGTCACGGTCGCGGTCCAGGTCAGTTACGCGCCCTGCAAATGAAGTTGTACCAGGAGAGGGCTTCAAGGACTCTATTCAAAAGGGCAAGGCTATTAAACTTGCTAAGAATTCTAATAAAAAGAGAAACAAGGATGCCCGTCGTGGAGAAGCTGATAGAGTTATACCTAATCTGAAGCCCAAACACTTGTATTCTGGGAAGCGCTCCAGTGGAAAGACTGACAGACGCTGA	2028	0.4241	MVHYNFKKITVVPNGKDFIDIILSRTQRQTPTVVHKGYAITRLRQFYMRKVKYTQQNFHEKLSTIVDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKDYVRLLKYGDSLYRCKCLKVAALGRMCTVLKRIGPSLAYLEQIRQHMARLPSIDPNTRTVLICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDISGSCGYTIAQQAALFHSIKSLFMNKPLIIVCNKTDLQPLEGLSEEDMKLVMEMKSEALKTVIGQDGDITNDEGVLLTMSTLTEDGVMAVKNAACERLLNQRVEIKMKSKKINDCLNRFHVALPKPRDQKERLPCIPPAVLEARSKQAAEEEKRKTEKELENENGGAGVYSMNLRKHYILADDEWKEDILPEILDGHNVYDFIDPDILHRVEELEREDGFRQAEDEDDFEIDGTELTPEQQAALAEIRKKKSLLIQQHRIKKSTAESRPTVPRKFDKDKQFTSERMGRQLSSLGLDPSLAINRMRSRSVSRRGRKRDRSPESAHGGDGMDIDGDTPSKKQRLSRSRSRSRSVTRPANEVVPGEGFKDSIQKGKAIKLAKNSNKKRNKDARRGEADRVIPNLKPKHLYSGKRSSGKTDRR*	676

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan8g1746	675	PANTHER	NUCLEOLAR GTP-BINDING PROTEIN 1	1	675	-	-
	Lan8g1746	675	CDD	NOG	169	355	-	-
	Lan8g1746	675	MobiDBLite	consensus disorder prediction	517	540	-	-
	Lan8g1746	675	ProSiteProfiles	OBG-type guanine nucleotide-binding (G) domain profile.	169	355	IPR031167	GO:0005525
	Lan8g1746	675	Gene3D	-	3	161	-	-
	Lan8g1746	675	MobiDBLite	consensus disorder prediction	570	597	-	-
	Lan8g1746	675	Pfam	NOGCT (NUC087) domain	410	463	IPR012973	-
	Lan8g1746	675	MobiDBLite	consensus disorder prediction	515	675	-	-
	Lan8g1746	675	Gene3D	-	162	373	IPR027417	-
	Lan8g1746	675	Coils	Coil	397	422	-	-
	Lan8g1746	675	MobiDBLite	consensus disorder prediction	642	656	-	-
	Lan8g1746	675	Pfam	NOG1 N-terminal helical domain	6	165	IPR041623	-
	Lan8g1746	675	PRINTS	GTP1/OBG GTP-binding protein family signature	171	191	IPR006073	GO:0005525
	Lan8g1746	675	PRINTS	GTP1/OBG GTP-binding protein family signature	192	210	IPR006073	GO:0005525
	Lan8g1746	675	PRINTS	GTP1/OBG GTP-binding protein family signature	219	234	IPR006073	GO:0005525
	Lan8g1746	675	PANTHER	NUCLEOLAR GTP-BINDING PROTEIN 1	1	675	-	-
	Lan8g1746	675	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	48	310	IPR027417	-
	Lan8g1746	675	PIRSF	NOG1	1	675	IPR024926	-
	Lan8g1746	675	Pfam	Nucleolar GTP-binding protein 1 (NOG1)	236	292	IPR010674	GO:0005525

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan8g1746	Lan-Chr8	24161468	24165040	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan8g1746	K06943		-	gmx:100795311	1181.39

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan7g0214	7	1338729	1342592	Lan8g1746	8	24161468	24165040	LSH