Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1714 ATGGCTACCTCTTCTTCTTTCACTCTCTCACTTTTCTTTGCTTCATTCCTATTTCTCACCATCACCACAAATGCCCTCTTCCTAACCCTCGTTAACAACTGTAAGTACACCGTCTGGCCCGCCATCCAGCCCAACGCCGGCCACCCTCTCCTCGCCGGCGGCGGCCTCCAACTCAACCCCCTCACCCACCAGACCATCCCTTTCCCAGACTCCCACTGGTCTGGCCGTGTCTGGCCCCGAACCGGCTGTACCTACGCCGCTAACCACCAGTTCACCTGCGCCACCGGCGACTGCGGCGGCCGCCTCCAGTGCAACGGCGCAGGAGGCTCACCTCCTGCCACGCTGGCTCAGTTCGAAGTGCACCACGGCAACAACGACTTCTCCTCTTACGGCGTCAGCTTAGTTGACGGCTTTAACATTCCGTTAACGATTACACCTCACGAGGGCAAAGGTGTGTGCCCCGTGGTGGGTTGTCGCAACGATCTCGTTGCCACGTGTCCTCCACCGTTACAACACCGGGTTCCGTTAGGTCACGGCCCTGTGGTCGCGTGTAAGAGTGGTTGCGAAGCTTTTCATACTGACGAGCTTTGTTGTACGAACCATTATAATAGCCCACAGATGTGTAAGGGGAGCGTGTACTCCACGTACTTCAAGCACGCGTGTCCTGCTACCTTCACCTTCGCGCACGATAACCCTTCCTTCATGCATCAGTGTTCTTCACCTCGTGAGCTTAAGATTATCTTCTGCCATTAA 753 0.5618 MATSSSFTLSLFFASFLFLTITTNALFLTLVNNCKYTVWPAIQPNAGHPLLAGGGLQLNPLTHQTIPFPDSHWSGRVWPRTGCTYAANHQFTCATGDCGGRLQCNGAGGSPPATLAQFEVHHGNNDFSSYGVSLVDGFNIPLTITPHEGKGVCPVVGCRNDLVATCPPPLQHRVPLGHGPVVACKSGCEAFHTDELCCTNHYNSPQMCKGSVYSTYFKHACPATFTFAHDNPSFMHQCSSPRELKIIFCH* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1714 250 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 7 250 - -
Lan8g1714 250 Gene3D Thaumatin 27 249 IPR037176 -
Lan8g1714 250 ProSiteProfiles Thaumatin family profile. 28 250 IPR001938 -
Lan8g1714 250 PIRSF PR5 1 250 IPR001938 -
Lan8g1714 250 CDD TLP-PA 28 249 - -
Lan8g1714 250 SUPERFAMILY Osmotin, thaumatin-like protein 27 249 IPR037176 -
Lan8g1714 250 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Lan8g1714 250 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Lan8g1714 250 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Lan8g1714 250 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Lan8g1714 250 SMART tha2 28 250 IPR001938 -
Lan8g1714 250 Pfam Thaumatin family 32 249 IPR001938 -
Lan8g1714 250 PANTHER OS03G0233200 PROTEIN 7 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1714 Lan-Chr8 23966103 23967094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1714 7 249 Receptor kinase-like Gene Family AT5G38280 37.349 6.77e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1714 - - lja:Lj3g3v3188510.1 429.869