Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1689 ATGACTCCGATGGCGGCGTCACGAATAGTAATAGCCCATCCCTACCGTCATTCCATTCCTTCAGAAACCGTTCCATCACCCTTTCTCAGCCTCAACCTCAATCTTAAATCTCACCCAAAACGGTACCGTTACATTGGCATTCACGCTTCTATTCGGTCACATAAGGAGAACGATCTCAACGATAAAACAAACCCTCTCGAAATTCCAAATACACCCTCCGATCACTCCTCTTCAAGCCACGTCATCTCCAAAGATCTCCTCTCTCTTCCTCGGCCATTGTCATCGTCGCTATTCTCTGATACAGTTTCTGATGGTTCACGCCTTCGTGTTGCATATCAGGGAGTTCCTGGTGCTTATAGTGAATCAGCTGCACTGAAAGCTTATCCAAATTGTGAAGCTGTGCCTTGTGATCAATTTGATACCGCTTTTGAAGCTGTTGAAAAGTGGCTTGTTGACAGAGCAGTTTTACCAATTGAGAATTCTTTAGGAGGGAGCATCCACAGAAATTACGACCTTTTACTCCGGCACAATTTGCAAATAGTAGGAGAATTAAAATTTGCAGTCCACCATTGTCTGATGGCTAATGATGGTGTTAAACTTGAGGATTTGAACCGAGTTCTTAGTCATCCACAGGCTCTTGCACAATGTGAGAACACGCTGACAAAGTTGGGATTGGTTAGAGAAGCAGTTGACGATACAGCTGGTGCTGCAAAGCACATTGCCTCTCACAAAATACGAGATGCTGGAGCAGTTGCTAGTTCGGCCGCTGCAAAGATCTATGGCTTGAATATACTTGCTGAAGACATTCAGGATGATAGTGATAATATCACCCGATTTCTAATTTTAGCGCGCGAACCTATAATTCCAGGCACAGACAGGCCTTTTAAGACAAGCATAGTTTTTTCTTTGGAAGAAGGTCCTGGGGTACTTTTCATGGCCCTTGCTGTTTTTGCTCTCCGTCAAATTAACTTAACCAAGATTGAAAGTCGCCCTTTGCGGAAGCAACCTTTACGAGTGTCTGACGATAACAACAATGTCAAGTACTTTGATTATTTTTTTTATGTTGATTTCGAAGCTTCAATGGCTGATCAGAGTGCACAAAATGCCCTAAGACATCTAAAGGAGTTCGCTACATTTTTGCGGGTGCTTGGGAGTTACCCTTTGGACACTAGCTCATAG 1179 0.436 MTPMAASRIVIAHPYRHSIPSETVPSPFLSLNLNLKSHPKRYRYIGIHASIRSHKENDLNDKTNPLEIPNTPSDHSSSSHVISKDLLSLPRPLSSSLFSDTVSDGSRLRVAYQGVPGAYSESAALKAYPNCEAVPCDQFDTAFEAVEKWLVDRAVLPIENSLGGSIHRNYDLLLRHNLQIVGELKFAVHHCLMANDGVKLEDLNRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKHIASHKIRDAGAVASSAAAKIYGLNILAEDIQDDSDNITRFLILAREPIIPGTDRPFKTSIVFSLEEGPGVLFMALAVFALRQINLTKIESRPLRKQPLRVSDDNNNVKYFDYFFYVDFEASMADQSAQNALRHLKEFATFLRVLGSYPLDTSS* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1689 392 CDD ACT_CM-PDT 296 387 - -
Lan8g1689 392 ProSitePatterns Prephenate dehydratase signature 2. 324 331 IPR018528 GO:0004664|GO:0009094
Lan8g1689 392 ProSiteProfiles ACT domain profile. 298 387 IPR002912 -
Lan8g1689 392 MobiDBLite consensus disorder prediction 63 79 - -
Lan8g1689 392 SUPERFAMILY Periplasmic binding protein-like II 109 290 - -
Lan8g1689 392 Gene3D - 291 390 - -
Lan8g1689 392 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 29 391 - -
Lan8g1689 392 ProSitePatterns Prephenate dehydratase signature 1. 260 282 IPR018528 GO:0004664|GO:0009094
Lan8g1689 392 Pfam Prephenate dehydratase 110 286 IPR001086 GO:0004664|GO:0009094
Lan8g1689 392 PANTHER AROGENATE DEHYDRATASE 29 391 - -
Lan8g1689 392 CDD PBP2_Ct-PDT_like 109 286 - -
Lan8g1689 392 SUPERFAMILY ACT-like 279 388 IPR045865 -
Lan8g1689 392 Gene3D - 104 192 - -
Lan8g1689 392 MobiDBLite consensus disorder prediction 56 79 - -
Lan8g1689 392 ProSiteProfiles Prephenate dehydratase domain profile. 109 284 IPR001086 GO:0004664|GO:0009094
Lan8g1689 392 Gene3D - 193 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1689 Lan-Chr8 23779160 23782843 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1689 K05359 - gmx:100787387 550.436