Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1637 ATGGCATCAACATTACCTTCTCTCTCCTCCACCTCTTCTTCACTTTTGACTCACACCTTTACCGCTAACTCAAATGGACCCAACAAGAGTGCGGGATTTTTGGTTTTCGCTCAAAAGAAGACCAAGAAAATTCGAAAGATAATATTGAAGGAAGATGTGGAGTTGTTGGGAAAGAAAGGATCACTTGTTGATGTGAGGGCTGGGTTTTACAGAAATTTTCTGCATCCCACTGGAAAGGCTTCAATTGTCACTCCTCAACTGCTCAAGGAAATGAAGGTAGAAGAAGAAAGAATTGATGCTGAAAAAAGGCGGGTATTAGAAGAGGCACAACAACTTGCTCTAATTTTTGAAACTGTTGGGGCTTTCAAGGTGAAGCGTAAAGGCGGTAAAGGGAAACAAATTTTTGGAAGTGTCACAGCTCAAGATCTTGTTGACATAATCAAGGCACAGCTTCAAAGGGAGGTGGACAAGAGAATTGTTGAGCTTCCAGAGATCAGGGAAACAGGAGAATACATTGCAGAGTTAAAGCTTCACCCGGAAGTTACAGCTAGAGTGAAGGTGAATGTTTTTGCTAACTAA 579 0.4162 MASTLPSLSSTSSSLLTHTFTANSNGPNKSAGFLVFAQKKTKKIRKIILKEDVELLGKKGSLVDVRAGFYRNFLHPTGKASIVTPQLLKEMKVEEERIDAEKRRVLEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVELPEIRETGEYIAELKLHPEVTARVKVNVFAN* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1637 192 Coils Coil 88 111 - -
Lan8g1637 192 Pfam Ribosomal protein L9, N-terminal domain 46 91 IPR020070 -
Lan8g1637 192 PANTHER 50S RIBOSOMAL PROTEIN L9, CHLOROPLASTIC 3 192 - -
Lan8g1637 192 ProSitePatterns Ribosomal protein L9 signature. 57 84 IPR020070 -
Lan8g1637 192 SUPERFAMILY L9 N-domain-like 46 100 IPR009027 -
Lan8g1637 192 TIGRFAM L9: ribosomal protein bL9 46 191 IPR020594 GO:0003735|GO:0005840|GO:0006412
Lan8g1637 192 SUPERFAMILY Ribosomal protein L9 C-domain 104 191 IPR036791 -
Lan8g1637 192 Pfam Ribosomal protein L9, C-terminal domain 107 190 IPR020069 -
Lan8g1637 192 Hamap 50S ribosomal protein L9 [rplI]. 45 192 IPR020594 GO:0003735|GO:0005840|GO:0006412
Lan8g1637 192 Gene3D - 46 104 IPR036935 -
Lan8g1637 192 PANTHER 50S RIBOSOMAL PROTEIN L9 3 192 IPR000244 GO:0003735|GO:0005840|GO:0006412
Lan8g1637 192 Gene3D - 105 192 IPR036791 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1637 Lan-Chr8 23342171 23346095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1637 K02939 - gmx:100500390 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0327 7 2204606 2207595 Lan8g1637 8 23342171 23346095 LSH