Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1604 ATGGTTCATGAAACGAGATCACATGTCCATGCATCTGGAGAAGAAGAGAAGGTGATAATGACAAGGAAGCAAAAAGCTGAGTCCAAAACACACGAAGTAGAACATTCTCCTAAGAAAGCCAAGGTAGAAAATGAGGATGATGGCCACACCAATGGAAAACATGCACCTGATGATGTTACTGTAGAATATGATGAATTCTGTAAAGCCATAAATGAGCACCTCTCTGTTGACCAGTTGAAAGAAATTTTGGAGGCTAATGGTCTTGATTCCTCTGGCTCTGATCTTGAATTCAGAAGAAGATGCCAAGACTTGTTGTTTTATGGTGCATTGGAGAAATGCCCTGTTTGCAATGGAAGTTTGGAGTTTGATGGCAGAGTTTTCTCTTGCAAAGGGTTCTATAGTGAGTGGGCTAGTTGCACTTTCAGCACCAGAGACCCTCCAAGGAAACAGGAACCTATTAACATACCAGATTCTGTTCAGAACTCTCTAGTTTCAGATTTGTTAAAGAAATATCAGGACCCTAACAACAGGCCTCAGATGAATGTAAACTTATTAGCAGATAAACCATTTACTGGGATGATGATATCTTTGATGGGTCGTCTAACTCGGACACATCACTATTGGAAAAGAACTATTGAAAAGCATGGAGGGATGGTGGCAAACTCTATAATTGGGGCAACTTGTTTGGTGGCTTCACCTGCTGAGCGAGATCGTGGTGGTACATCCAAACTTGCAGAAGCCATGGAAAGGGGTATACCTGTGGTGAGGGAGGCATGGTTGATTGACAGCATTGAAAAGCAAGAACCTCAACCTTTGGAAGCATATGATCTTGTCTCTGATCTTTCTGAAGCAGGCAAGGGAATCCCCTGGGACAAACAAGATCCTGGAGAGGAGGCCATTGAGTCACTCTCAGCAGAACTCAAGCTTTATGGGAAGAGAGGGGTCTATAAAGACACCAAATTGGAGGAACAAGGTGGAAAGATATATGAAAAAGATGGGATATTATACAACTGTGCCTTCTCTCTTTGTGACCAAGGGAGAGGACTGAATGACTACTGTGTCATGCAACTGATTGTTGTCCCGGAGAATCGTTTGCATCTGTACTTTAAAAAAGGAAGAGTTGGTGATGATCCAAATGCAGAGGAGAGATTAGAAGAGTTAGATAATGAGGACAATGCTGTCAAAGAGTTTGTCAGGCTCTTTGAGGAAGTAACTGGAAATGAGTTTGAGCCTTGGGAAAGGGAGAAGAAGTTCCAAAAGAGGCCATTGAAGTTTTACCCCATTGACATGGATGATGGAGTTGAAGTTAGACACGGCGCATTAGGTCTTCGACAGCTTGGGATAGCAGCAACACACTGTAAACTTGAGCCTCAGGTTGCAAATTTTATGAAGGTTATGTGCAGCCAAGAAATATATAAGTATGCATTAATGGAGATGGTTTATGACTGTCCTGACCTTCCCATAGGCATGGTTACAAATCTTCACCTGAAAAGATGTGAGGAAGTTCTCTTGGAATTCATAGAGAAGGTGAAGTCATTGAAAGAGACTGGACCAAAGGCTGAGGCTGTGTGGACTGATTTTAGCCAAAGATGGTTCACATTGATGCATTCCACAAGGCCTTTCATATTTAGAGATTATCAGGAGATTGCAGAACATGCTGCTGCTGCCCTTGAAGGTGTTAGGGACATAACTGTGGCTTCTCACCTCATTGGAGATATGACTGGCTCTACCATTGATGATCCATTATCAGAAGCATACAACAAATTGGGCTGCTCTATTTCTCCCTTGGACAAAGATTCAGATGATTATGATATGATTGTGAAATATCTTGAGAAAACTTATGAACCTGTCAAAGTTGGAGACTTGGAATATGGAGTGTCTGTTCAAAACATTTTTGCTGTGGAGTCTAGTGCTTTCCCTCCCTATGAAGAAATACAAAAGTTGCCAAACAAGGTTCTTCTTTGGTGTGGATCACGAAGCTCAAATCTTTTGAGGCATTTGCACAAGGGGTTCTTGCCAGCAATATGCTCACTACCAGTTCCAGGTTATATGTTTGGCAAAGCCATTGTTTGCTCTGATGCTGCAGCAGAAGCTGCAAGATATGGTTTCACTGCTGTGGATAGGCCAGAAGGGTTCTTGGTTTTGGCCATTGCTTCTCTAGGAAATGAGATCACTCAATTGAAAAACCCACCTGAGGACACAACATCCTTGGAAGAAAAGAAGGTTGGAGTGAAGGGGCTAGGGAAAAAGAAAACAGATGAATCAGAACACTTTGTTTGGAAAGATGACATAAAAGTTCCTTGTGGTCAAATAGTTCCCTCAGAGCATCAAGATAGCCCCCTAGAATACAATGAGTATGCTGTCTATGATCCTAAGCAGGTACGCATAAGCTTTTTGGTGGCAGTGAAGTATGATGAGAAGGATGTGGAGTTTGATACAGCAGAGGGAAAGGACCAAGAATGA 2463 0.4231 MVHETRSHVHASGEEEKVIMTRKQKAESKTHEVEHSPKKAKVENEDDGHTNGKHAPDDVTVEYDEFCKAINEHLSVDQLKEILEANGLDSSGSDLEFRRRCQDLLFYGALEKCPVCNGSLEFDGRVFSCKGFYSEWASCTFSTRDPPRKQEPINIPDSVQNSLVSDLLKKYQDPNNRPQMNVNLLADKPFTGMMISLMGRLTRTHHYWKRTIEKHGGMVANSIIGATCLVASPAERDRGGTSKLAEAMERGIPVVREAWLIDSIEKQEPQPLEAYDLVSDLSEAGKGIPWDKQDPGEEAIESLSAELKLYGKRGVYKDTKLEEQGGKIYEKDGILYNCAFSLCDQGRGLNDYCVMQLIVVPENRLHLYFKKGRVGDDPNAEERLEELDNEDNAVKEFVRLFEEVTGNEFEPWEREKKFQKRPLKFYPIDMDDGVEVRHGALGLRQLGIAATHCKLEPQVANFMKVMCSQEIYKYALMEMVYDCPDLPIGMVTNLHLKRCEEVLLEFIEKVKSLKETGPKAEAVWTDFSQRWFTLMHSTRPFIFRDYQEIAEHAAAALEGVRDITVASHLIGDMTGSTIDDPLSEAYNKLGCSISPLDKDSDDYDMIVKYLEKTYEPVKVGDLEYGVSVQNIFAVESSAFPPYEEIQKLPNKVLLWCGSRSSNLLRHLHKGFLPAICSLPVPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGFLVLAIASLGNEITQLKNPPEDTTSLEEKKVGVKGLGKKKTDESEHFVWKDDIKVPCGQIVPSEHQDSPLEYNEYAVYDPKQVRISFLVAVKYDEKDVEFDTAEGKDQE* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1604 820 MobiDBLite consensus disorder prediction 1 57 - -
Lan8g1604 820 ProSiteProfiles BRCT domain profile. 185 277 IPR001357 -
Lan8g1604 820 ProSiteProfiles PARP catalytic domain profile. 580 811 IPR012317 GO:0003950
Lan8g1604 820 PANTHER DNA LIGASE 2 808 - -
Lan8g1604 820 Pfam PADR1 (NUC008) domain 99 149 IPR012982 -
Lan8g1604 820 Gene3D - 448 589 IPR036616 GO:0003950
Lan8g1604 820 Gene3D BRCT domain 184 285 IPR036420 -
Lan8g1604 820 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 452 588 IPR036616 GO:0003950
Lan8g1604 820 SMART WGR_cls 336 419 IPR008893 -
Lan8g1604 820 SUPERFAMILY BRCT domain 187 289 IPR036420 -
Lan8g1604 820 Pfam BRCA1 C Terminus (BRCT) domain 188 264 IPR001357 -
Lan8g1604 820 Pfam Poly(ADP-ribose) polymerase, regulatory domain 453 586 IPR004102 GO:0003950
Lan8g1604 820 ProSiteProfiles WGR domain profile. 325 425 IPR008893 -
Lan8g1604 820 CDD WGR_PARP1_like 326 432 - -
Lan8g1604 820 PANTHER POLY [ADP-RIBOSE] POLYMERASE 2 808 - -
Lan8g1604 820 SMART PADR1_2 97 150 IPR012982 -
Lan8g1604 820 Coils Coil 496 516 - -
Lan8g1604 820 SUPERFAMILY ADP-ribosylation 589 807 - -
Lan8g1604 820 CDD parp_like 452 803 - -
Lan8g1604 820 Pfam Poly(ADP-ribose) polymerase catalytic domain 600 803 IPR012317 GO:0003950
Lan8g1604 820 Pfam WGR domain 336 415 IPR008893 -
Lan8g1604 820 Gene3D - 58 178 - -
Lan8g1604 820 SUPERFAMILY WGR domain-like 301 430 IPR036930 -
Lan8g1604 820 SMART BRCT_7 187 267 IPR001357 -
Lan8g1604 820 ProSiteProfiles SAP motif profile. 71 105 IPR003034 -
Lan8g1604 820 Gene3D - 590 805 - -
Lan8g1604 820 ProSiteProfiles PARP alpha-helical domain profile. 452 571 IPR004102 GO:0003950
Lan8g1604 820 CDD BRCT_PARP1 190 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1604 Lan-Chr8 22995184 22999980 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1604 K10798 - gmx:548024 1429.46