Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1593 ATGGCGGTGAGGGCAACGGTTTCGCGATTTCCAATCGATACTGACGCACGCGAGGGCTCAGGCTTACTATGGGGAGTAACCGTCACTCCCTTCGCCGCCGTCGACGAGAACGGTCAATCTCCGGCATACGGATCCGGTGGCGACCTCCTCCCCCGATGTGAGAACTGCTATGCCTATTTCAACACCTTTTGTGAGCTTGAACAGTGGTCCTGGTCTTGCTCTCTCTGCGGTTCTGTCAATGGCCTATCCTCTGATGCTGTCGAACGCTACTCTCGTCCTCAATCCTGCGCTGAGATGATGTCATCATTCGTAGATCTCGAATTGCCACAAGAAGAATCAGCGGAAGGAGGAGGAGCAATGCAAGCATGTCCAGTATATGTTGCTGCTGTTGACTTGTCCTCTTCAGAGGAGTTTCTGGAACTCACTAAAAGTGCATTGCTGGCAGCTTTGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACCTTCAGCCACAAACTAGGGCTGTATGATGTTCAAGGTCCTATACCTGTTGTCAAAAATGTTTTTATCCCTCCTGATGCAGAGGGAACCTTGCCAATTGAGCTTGAAGATGTGATGCCTTTGTTACAGTTTCTGGCTCCTGTGGAAACTTGTAAGGATCGTATTGCATCAGCACTTGAAACACTTAGACCAACATCTTCATGGGAGAGAACCACGGCAGCAGGTCAAGGACTGGATGGTGTTCTGTTAGGTGGGCGTGGTTTTGGAGTAGCAATGGAAGCCCTTTGCAATTACCTTGGATCTGAATATGGGAACACCTATGCTTTAGCTAGAGTCTTTGCCTTCTTGTCGGGGGCCCCTGATTATGGCGCTGGACAGTTGGATACAAGACGATATGGCGAGCAGTATGCAAGCAAAGGAGAAGATGCAGATCGTGCTTTGCTTCCAGAGCAGACACCATTTTATAAAGATCTGGCTGCTGTTGCTGTTCAAGCAGGTGTCTGTGTGGACATTTTTGCTGTGACAAATGAGTACACAGACTTGGCATCCCTAAAATTTCTGAGTATTGAAAGTGGGGGCTCCTTATTTTTATATACAAGTACTGAGGATTCAACCTTGCCTCAGGACATGTATCGAATGCTGAGCCGACCATATGCTTTTGGTTGTGTCCTCCGAATGAGAACCTCAACTGAATTTAAACCTGGAAATTCTTATGGTCACTTCTTCCCAGATCCACAGTATGAAAATGTTCAACACATCATATGTTGTGATTCTTATGCTACATATGCTTATGACTTTGTGTTTGAGAACAATGTTGGATTTTCAAGAACTCTGTCAGATCTTCCTACAATTCAGATTGCATTTCAGTACGCAGTTGTTGTTCCTCCCCAGGAACTTTCAGATTCAGAAGGGGTTTCTACAAGTAGAACCACACATTCCCTTAAACGCCGGCTAAGGATCCGGACATTGCAGTTTGGCGTTGCTAAAAACATTCATGAACTTTATGACAGCTGTGATCCTGAAGTTTTGCTATCATTGCTTGTTCACAAGGTTATATTAGCCTCTTTAGAGGAAGGAGTTCGGGAGGGTAGGATTTTGCTTCAAGAATGGCTAGTGATCCTCACAGCTCAGTACAATGATGCTTATAAACTTATTCAGAATAGTAATGGAAGTTCCATAATCTCTCAGATTGATGTTGCATTCTCTCAATGTCCTCAACTGCAGCCCCTACCGCGCCTAATTTTCGCTCTCCTTCGAAATCCTCTTCTCCGCTTTCATGAAGAAGGCGTTCACCCTGACTATCGCATCTATCTTCAATGCCTTTTCAGTGTGCTGGAACCAAGTTCTCTTCATCGTGCAGTGTATCCAGTGTTGACATCATATGCTACTCCAGATAAACAAGCATATCCTCGCCACTCATTGAGTCGTGCTGCACTGATTACCAGTGGCAGTCCGATATTTTTCCTTGATGCATTCACAATTCTGATTGTGTTTTATTCTTCGACTGCAGACCCAACACTTCCTTTTCCTCCACCTCATGATTGTTTGTTAAGGACTACAATCAACAAGTTGAAGCAAGAGAGATGCATCACTCCCAAACTCATTTTTATTCGAGGAGGGCATGATGATGCCTCAATTTTTGAGAACTTTCTGATCGAGGAGCAAGATGTTGATGGAAGTGGCCTTACAAGTGTGATGGGTTTTGTTTCCTTTCTTGAAGATATTACGCAGAAAGTTTTGGAGTTCATGAAGTAG 2241 0.4502 MAVRATVSRFPIDTDAREGSGLLWGVTVTPFAAVDENGQSPAYGSGGDLLPRCENCYAYFNTFCELEQWSWSCSLCGSVNGLSSDAVERYSRPQSCAEMMSSFVDLELPQEESAEGGGAMQACPVYVAAVDLSSSEEFLELTKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPPDAEGTLPIELEDVMPLLQFLAPVETCKDRIASALETLRPTSSWERTTAAGQGLDGVLLGGRGFGVAMEALCNYLGSEYGNTYALARVFAFLSGAPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTSTEDSTLPQDMYRMLSRPYAFGCVLRMRTSTEFKPGNSYGHFFPDPQYENVQHIICCDSYATYAYDFVFENNVGFSRTLSDLPTIQIAFQYAVVVPPQELSDSEGVSTSRTTHSLKRRLRIRTLQFGVAKNIHELYDSCDPEVLLSLLVHKVILASLEEGVREGRILLQEWLVILTAQYNDAYKLIQNSNGSSIISQIDVAFSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSVLEPSSLHRAVYPVLTSYATPDKQAYPRHSLSRAALITSGSPIFFLDAFTILIVFYSSTADPTLPFPPPHDCLLRTTINKLKQERCITPKLIFIRGGHDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1593 746 Pfam Sec23/Sec24 zinc finger 51 82 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Lan8g1593 746 Gene3D - 31 101 - -
Lan8g1593 746 SUPERFAMILY beta-sandwich domain of Sec23/24 3 500 - -
Lan8g1593 746 Gene3D Sec23/Sec24 helical domain 472 630 - -
Lan8g1593 746 SUPERFAMILY vWA-like 124 378 IPR036465 -
Lan8g1593 746 PANTHER OS05G0443300 PROTEIN 1 744 - -
Lan8g1593 746 Pfam Sec23/Sec24 helical domain 501 613 IPR006900 GO:0006886|GO:0006888|GO:0030127
Lan8g1593 746 PANTHER SEC24-RELATED PROTEIN 1 744 - -
Lan8g1593 746 Pfam Sec23/Sec24 trunk domain 123 375 IPR006896 GO:0006886|GO:0006888|GO:0030127
Lan8g1593 746 SUPERFAMILY Helical domain of Sec23/24 501 617 IPR036175 GO:0006886|GO:0006888|GO:0030127
Lan8g1593 746 Gene3D von Willebrand factor, type A domain 123 380 IPR036465 -
Lan8g1593 746 SUPERFAMILY Zn-finger domain of Sec23/24 48 111 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1593 Lan-Chr8 22923721 22930386 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1593 - - gmx:100807557 1400.96