Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1569 ATGGCATTTCACTCTCTTCCCAACCTCTACCTTATTCTATCCTTCTCAATCCTCTTCCTCTCTTCTTTTCTCGCTCAAGCTAAGGTTACCTTCAAATACTGCGATAAGAAGGGAAATTATGATGTGAAAGTGTCTGGAATTGAAATATCACCAAATCCTGTTGTCAGTGGTAACCCGGCTAACTTCAAGATCTCAGCTTCTTCGGGAAAAGCTATTTCTGGTGGGGAGGTGGTAATCGGAGTTTCATACATTGGGGTGCCTGTCCACACTGAAAGAATTGATCTATGTCAGGAAGTAACCTGTCCCGTTTCTAATGGCAATTTTGTGATTTCTCACTCCCAAACATTGCCTTCAATTACTCCACCGGGACCCTATGCTTTGAAGATGACGCTGAAGGATGACAATGGCGAGTTGTTAACTTGCATCAAGTTTAATTTCAAAATTGTTTTTGGATCATTAGTGTCTGATATCTGA 474 0.4135 MAFHSLPNLYLILSFSILFLSSFLAQAKVTFKYCDKKGNYDVKVSGIEISPNPVVSGNPANFKISASSGKAISGGEVVIGVSYIGVPVHTERIDLCQEVTCPVSNGNFVISHSQTLPSITPPGPYALKMTLKDDNGELLTCIKFNFKIVFGSLVSDI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1569 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 5 155 IPR039670 -
Lan8g1569 157 Gene3D - 27 151 - -
Lan8g1569 157 CDD PG-PI_TP 31 146 IPR033917 GO:0032366
Lan8g1569 157 SUPERFAMILY E set domains 28 149 IPR014756 -
Lan8g1569 157 Pfam ML domain 29 148 IPR003172 -
Lan8g1569 157 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 5 155 - -
Lan8g1569 157 SMART pgtp_13 31 146 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1569 Lan-Chr8 22713403 22716081 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1569 - - pvu:PHAVU_011G100100g 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1569 8 22713403 22716081 Lan13g0522 13 3944951 3948118 LSH