Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1559 ATGGCTGAAACCCTAAGCCCTAACCCGGGTGGCCAGAAACAGAGGCTACCCATGGCCGCTCGCATCCAATCCCCTACCAGCCCCTTCTTCTTGGGCTCCAACGACGACCAGCTTGAACGTGCCCGTGCACGCGCTGCACGCGCCGCCGCCATCCGCAGCAGGAACGTCGCTGCCAATTTGAATTCCCAATCTCAAGATTCTGATCCCTGCCTCGACAAGCAGCAGATTCTCGATTTGTTCCAAAACTGCATCAAGCTCGCTAGTGAAAATAAAATCAATCAGAAAAACACTTGGGGGTTGAATTTGATCGATCACCTCACTGATATTATTAAGGCTGAAGAAGAAGGTGATAGTACCGAGACTAATTTTCAAAAGGCAAGCTGCACCCTTGAGGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCAGTGCATTCTGAGGCTTATAAAGTCCTTGGTGGGATGAACAGAGCAGGCCAAGAAGCTGAGCAAGAGACTCCTTTGGAGGTGGCTAATGTTGAAAGTGGACAAGAAGAAAGCAGGAAAGAGACAAACAAAAAGTTGTCACCTCTCTCAACACTGGAATCATCTTTTGAGGTTCTTAATGTAAAGAAGTTTGATGCTGCATTTGCTGTTGATCCCCTCTATCGCCAGACAACAGCACGGTTTGATGAAGGTGGAGCCAAAGGTCTTTTAATGAATAATCTTGGTGTATATGGTGGATGTAGGGTGCTCTTTGATTCACAAGAAGTGCCTGCAAGGTGCATGGCAAGTCAAAATCAACATGATGTTTATGATACAATTGATCTTTCCTTTATGAAAGATTGTGTTGACCAGATGGTATCAGATATGTGTATGAAGGATGAAATTTCTCCAACTATCAGGACTATAGTCAATCAATTCGATGAAAATAATCGAAGGCCCACTAATTTTCAAATTGATGGCCAGAATTCAGCTGAAGATCTTGATGCAGCCTTTGACTGTGAAATTGAATCTGACAGAGTAGAATATGAGAACTACACGGCCTGGACTGATGATCATGATAACCAAACATTTGTTGCTGATTTGGGCTCTAATGATGCTGATCCAAGTTTTCCTAGTTACCTTGAGGAAAATGAGGGATTTCCTTCCCAAGGTCAAGACCCTGATATGGACGACAGATTTGAAAATGTTGATGGGTATTTATTTTTCAGTCTAGGTTTTAGTTCAAAACAAAATGCATGGGCTGGCCCTGATCATTGGAAGTATCGAAAATCTAAAGAGGTTCATCCCACTAATGAAGATGGGCCAACCCTAAAAACTACGCAGCCAAGGAGCAAGAAACAGGCTGAAGTTGATTTAAACTTCACAAGTTCTCTTGAGAAGAAAATGGCAGATATATTTGCTCCACCCAAGAATCCGAAATCATTACTGCTCCCTGAATGTAGACTGCCTTGCAATACAAAACTTCCAGAGGACTGCCACTATCAGCCAGAGGATCTTATCAAGTTATTTCTTCTGCCCAATGTGAAGTGTCTTGGAAGGAGGGCAAAAAGGTTCTCAGATGGATCTAGAGAACAACCAAATGACTATGAGGCATTCCCTTCATGGGATAATGGAAGTGCTTGTGGTGGGGAACCTGGTGACTATGAAGGTGATTTTCATAGTGACATAGAGGACTCTGGCACTCTTATTACTCAGCCTCGTCAGGTCAATAAAATTGAAGTCCAGTATGACAAAACATCTAAACGAATTGATGTTCAGGCACTGAAAATTACTCTATGGGACCATGTTCAAGAATCTGCTAAATTGCCTCTTCAGGATCAAAATGGAACAGTATCTTTCAAGAATATGTTGGCCAATTTTCCTGGCGAGTGCAATGCTGCTGCAGCTATTAGTGACATCTCTCCTCATTTGTGCTTCATATGTTTATTGCATTTGGCCAATGAGAAAGGATTGAGCATTCAAAGCTGCTCCAACTTGGATGATCTTGCCATATGCCTTCCACATGTTGATGATGCTATAAGTGGAGCAGTTTAG 2019 0.4284 MAETLSPNPGGQKQRLPMAARIQSPTSPFFLGSNDDQLERARARAARAAAIRSRNVAANLNSQSQDSDPCLDKQQILDLFQNCIKLASENKINQKNTWGLNLIDHLTDIIKAEEEGDSTETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEQETPLEVANVESGQEESRKETNKKLSPLSTLESSFEVLNVKKFDAAFAVDPLYRQTTARFDEGGAKGLLMNNLGVYGGCRVLFDSQEVPARCMASQNQHDVYDTIDLSFMKDCVDQMVSDMCMKDEISPTIRTIVNQFDENNRRPTNFQIDGQNSAEDLDAAFDCEIESDRVEYENYTAWTDDHDNQTFVADLGSNDADPSFPSYLEENEGFPSQGQDPDMDDRFENVDGYLFFSLGFSSKQNAWAGPDHWKYRKSKEVHPTNEDGPTLKTTQPRSKKQAEVDLNFTSSLEKKMADIFAPPKNPKSLLLPECRLPCNTKLPEDCHYQPEDLIKLFLLPNVKCLGRRAKRFSDGSREQPNDYEAFPSWDNGSACGGEPGDYEGDFHSDIEDSGTLITQPRQVNKIEVQYDKTSKRIDVQALKITLWDHVQESAKLPLQDQNGTVSFKNMLANFPGECNAAAAISDISPHLCFICLLHLANEKGLSIQSCSNLDDLAICLPHVDDAISGAV* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1559 672 PIRSF Condensin_H 543 663 IPR022816 GO:0000796|GO:0007076
Lan8g1559 672 PIRSF Condensin_H 1 548 IPR022816 GO:0000796|GO:0007076
Lan8g1559 672 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 665 - -
Lan8g1559 672 MobiDBLite consensus disorder prediction 420 442 - -
Lan8g1559 672 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 665 IPR022816 GO:0000796|GO:0007076
Lan8g1559 672 Pfam Condensin complex subunit 2 27 549 IPR022816 GO:0000796|GO:0007076
Lan8g1559 672 Pfam Condensin complex subunit 2 552 659 IPR022816 GO:0000796|GO:0007076
Lan8g1559 672 MobiDBLite consensus disorder prediction 160 189 - -
Lan8g1559 672 MobiDBLite consensus disorder prediction 428 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1559 Lan-Chr8 22631561 22636968 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1559 K06676 - gmx:100799781 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1559 8 22631561 22636968 Lan8g1559 8 22631561 22636968 ECH
Lan7g0413 7 2902067 2907445 Lan8g1559 8 22631561 22636968 LSH