Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1549 ATGAACAACGCACACAAGCTACGAGTTGCATTTGTAATAGCTACTACTATCGCAGCTATCTCCATCTTCTTCACCGTACGACGCCGTATCAGTCGTCGTAAGCAGAAATCTTCTTCAAGTTCATGCTATTTACATTCCGAACCCAAACCACAGCGCGTGTTCAAGCGCGTCTTAGCGGATAACTCTTACGCTCAGTTTAAACACTTGAAGCTCAATGACTCCACTAGCGATGAGTTTGCTTCACATTCACATCCGTTTGAGGCAGAGATTAGGGCATTGCTTAAAAATCATCTGCCTGACATCGAGCTTAGGACTGAGATCACAGACTTGGAAATGAATGATTCATATGTTTGGGTTGATACAGAGATGCAGTTGAAGGAACTGGTCAGTATATTGAGCAAAGAGAAGTTATTTGCTGTTGACACGGAACAGCATGGCTTGCGATCTTTTCTAGGGTTTACAGCATTAGTTCAAATTTCTACACAGGAGAAAGATTATTTGGTTGACACAATTGCCCTGCATGATTCAATGGGAATCCTTCGCCCTGTTTTTGCCAATTCTTCTATTTGTAAAGTGTTCCATGGGGCTGACAATGATGTTATCTGGCTACAAAGGGATTTCCATATATATATCGTTAATCTATTTGATACTTCAAAGGCATGCGAGGTGCTGTCAAAACCACAGAAATCACTAGCTTATTTACTCGAGACTTACTGCAGTGTGACAACAAATAAATTATTGCAGCGTGAAGATTGGAGACAGCGCCCCCTCTCTGAGGAAATGGTAGAATATGCACGTATGGATGCACACTATTTGTTGTATATTGCTAACTGTTTGATCACTGAGCTCAAAGAACTGGACAGTGACTCTTGTTCCAATGACAAATACCATTTTGTTCTTGAGGCTACTCGGCGTTCAAACATGATTTGCTTGCAACTTTTCACAAAAGAGAGTGAGGCATCTCCAGGAGAATCTGCTGCATCATCATTACTGTCACGTCATGTGAGCAGTGAAGGTTTTCCTTCAATTTCCAATGAAACCCAGTTTCAGAATATTGTGAGGCAACTCTGCACATGGAGAGATCTGATGGCTCGGATTCATGATGAGAACTTAAAATATGTACTGTCAGACCAGGCAATTGTTGTTTTAGCAAGTCATCCTTCAGCAAGTCACTCTGAAATATACAGCATCATAGCTCAGGCTGATGTCAATATGGAAACGGGTCTGAATGGTTTCAACCCTTACCCATCTCCTGTTGTTTGCAGCCACGTAGGTGACATTTATCATATACTTGCAGATGAGTTGGTTAGCCATGGTGATATCTATTCAGTTATTCTTCAGGAGTGCCTTGGTAAATATGGAAGTTGTCCACTTTCTATATTTAATTATGCTTTATTGGTTAACAGTAGCCCAAGACCTACTTTAGCCTATAAACACTCTGCCTTAAAAAATCCTAAACGAATTTCCCGGAAGGCTTCTCGAGATTTGTTTGTTCAAAAGTTCTCTTGTAAATCTCCCGTTTATCATAATTGCCGGATATTTGCTAATGATGGAAGATTGCTTTGTTATTGTGATCGGAAGAAGCTTGAATGGTACGTTAGTCGTGATCTCGCAAAAGTTGTTGAGGAGGACCCACCAGCCATAACGCTTCTTTTTGAACCCAAAGGTCGCCCAGAGGATGAAGACAACGACTTTTATATCCAGAGTAAGAAAAACATGTGTGTCGGGTGTGGTGAAGGAAATCACTACTTGCGGTACCGGATAATCCCATCGTGTTACAGAGTGCATTTCCCTGAGCATTTGAAAAGCCATCGTTCTCATGATATTGTCTTACTTTGTGTGGATTGCCATGAAGTTGCCCATGCTTCTGCAGAGAAGTATAAGAGAAAAATAGCTTCTGAATTTGGGATTCCTCTCTACGTTCGTAGAGTAATCCATCCAGGACAAGAGAATGAAGAACAGACAGAGGAAGGAGGTGTATCTCCATTACAGTTACGGACAGCTGCTATGGCTCTTCTGCGCCATGGACCAAGAATGCCTCCCAATCGCCGTGAAGAACTGACTGAGATTGTGAAGAGGTATTATGGAGGAAAGGAGATATCTGAGGAAGATCTAGAAAGAGCTTTGTTAGTTGGCATGAGTCCTCATGGAAAAAGAAAGTTTGAAAAGAAGAGAGGGAAAACTTCAAGAAATTCTATGGGGAGTACTGCTACAGAACCAGGACAGGAAAATCATGCTTGTTGCACAACCACAATGGGTAATATGAACATATCAAAAGTTGATGCTCCTAATGGTACATATGCAAATGAAGAAACAAGAAAGGAAGGGGATAGAGAAAATTTTATGGCAAAAGATGATTTTGGAAATCCCTCTTTAGCTTCTGATCTTGTGGTTGATGGAGCTGTCTCTGCTGCTTTTAATGGAAATACAAACACAGTTAAAACTACGGATTATAACGAAAGCAGTGATTTTGCTGTAAATGTTGATGATATCTGTCAGAGCCGAAGGCAGCCAGATGAAATTAGTGACTTGACCTGTCCCCCCAGAGATGAAAAATCAACTCAAACTAAACTTAATTCAAAACTATCACTCTTGGGCCACGGGCCACATGGCAGACAAGTAGTGGAACATTTACTGAAGGAATACGGTGAAGATGGCATTCGACAGTTTTGTCAAAGATGGAGACAAGTTTTTGTTGAATCTTTAAAGCCACATTTTCTTCCTGCTGGCTGGGATGTGAAACACAGTGGAATAAGGGACTTCGGCGAGTTCAGTGTATACAATCCTCATAAAAGGGAGGCTGCTACTAATACTTAA 2817 0.4121 MNNAHKLRVAFVIATTIAAISIFFTVRRRISRRKQKSSSSSCYLHSEPKPQRVFKRVLADNSYAQFKHLKLNDSTSDEFASHSHPFEAEIRALLKNHLPDIELRTEITDLEMNDSYVWVDTEMQLKELVSILSKEKLFAVDTEQHGLRSFLGFTALVQISTQEKDYLVDTIALHDSMGILRPVFANSSICKVFHGADNDVIWLQRDFHIYIVNLFDTSKACEVLSKPQKSLAYLLETYCSVTTNKLLQREDWRQRPLSEEMVEYARMDAHYLLYIANCLITELKELDSDSCSNDKYHFVLEATRRSNMICLQLFTKESEASPGESAASSLLSRHVSSEGFPSISNETQFQNIVRQLCTWRDLMARIHDENLKYVLSDQAIVVLASHPSASHSEIYSIIAQADVNMETGLNGFNPYPSPVVCSHVGDIYHILADELVSHGDIYSVILQECLGKYGSCPLSIFNYALLVNSSPRPTLAYKHSALKNPKRISRKASRDLFVQKFSCKSPVYHNCRIFANDGRLLCYCDRKKLEWYVSRDLAKVVEEDPPAITLLFEPKGRPEDEDNDFYIQSKKNMCVGCGEGNHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHASAEKYKRKIASEFGIPLYVRRVIHPGQENEEQTEEGGVSPLQLRTAAMALLRHGPRMPPNRREELTEIVKRYYGGKEISEEDLERALLVGMSPHGKRKFEKKRGKTSRNSMGSTATEPGQENHACCTTTMGNMNISKVDAPNGTYANEETRKEGDRENFMAKDDFGNPSLASDLVVDGAVSAAFNGNTNTVKTTDYNESSDFAVNVDDICQSRRQPDEISDLTCPPRDEKSTQTKLNSKLSLLGHGPHGRQVVEHLLKEYGEDGIRQFCQRWRQVFVESLKPHFLPAGWDVKHSGIRDFGEFSVYNPHKREAATNT* 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1549 938 MobiDBLite consensus disorder prediction 717 745 - -
Lan8g1549 938 Pfam 3'-5' exonuclease 116 283 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lan8g1549 938 SUPERFAMILY HRDC-like 348 432 IPR010997 GO:0000166|GO:0044237
Lan8g1549 938 PANTHER PROTEIN RRP6-LIKE 3 1 933 - -
Lan8g1549 938 Gene3D HRDC domain 340 439 IPR044876 -
Lan8g1549 938 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 1 933 IPR045092 GO:0000175|GO:0000467
Lan8g1549 938 Gene3D - 48 319 IPR036397 GO:0003676
Lan8g1549 938 SMART 35exoneu6 116 284 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lan8g1549 938 SUPERFAMILY Ribonuclease H-like 49 286 IPR012337 -
Lan8g1549 938 MobiDBLite consensus disorder prediction 730 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1549 Lan-Chr8 22520915 22528138 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1549 K12951 - gmx:100791485 1377.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1549 8 22520915 22528138 Lan8g1549 8 22520915 22528138 ECH