Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1548 ATGGCCGAACCCAAAGTTAAATACGATCGCCAACTCAGAATATGGGGTGACCAAGGGCAGGCAGCACTTGAGAAATCTAGCATATGCTTACTTAACTGTGGTCCTACTGGATCTGAAACACTTAAGAATCTCGTTCTTGGTGGAGTTGGAAGCATCACTGTGGTTGATGGGTCTAAAGTTGAAGTTGGTGACCTTGGAAACAATTTTATGGTGGATGAATCAAGCCTTGGGCAGTCAAAGGCAAAATGTGTATGCTCATTTCTTCAAGAGTTGAACGATGCTGTTAAAGCAAAATTTGTAGAAGAGGATCCAGAAACATTGATTGAGACAAATCCATCATTCTTTTCTCAGTTTACTTTGGTTGTTGCCACACAGTTGGTGGAAAGTTCAATGATAAAGCTCGATCGGATCTGTAGGGAGGCGAATGCTATGTTGATCTTTGCTCGCTCCTATGGCCTTACAGGGTTTGTTCGAATTAGTTTAAAGGAACATACTGTAATAGAGTCAAAACCTGATCATTTCTTGGATGACCTCCGGTTAAATAATCCTTGGCCTGAACTCAAGAGGTTAGCAGAAGGCTTTGACTTAAATGTGCAAGATCCTGTTGCTCATAAGCACATACCATATGTTGTAATTCTTGTTAAGATGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAATCTTCCATCAACAAGAGAAGAAAAAAGAGAGTTCAAGGAGCTTCTTAAGGCTGGGATGGTTGCACAAGATGAAGATAATTACAAAGAAGCTATTGATGCCTCTTTCAAAGTATTTGCTCCTCGAGGAATTAGTTCAGAATTGCAACAGATACTCAATGATAGTTCTGCTGAAGTGGACTCTAGCTCATCAGATTTTTGGGTGTTGGTGGCAGCTCTGAAGGAATTCATTGCAAATGAAGGTGGTGGGGAGGCGCCTCTTGAAGGCTCTATACCAGATATGACTTCTTCTACTGAGCAATATGTGAATTTGCAGAATATTTATCAAGCTAAGGCTGAGGCTGACTTTCTTGTAATGGAACGATTGGTAAGAAGTAGTTTGAAGAAAATTGGCAGAGATCCAAATAGCATTCCGAGGGCAACAATTAAAAGCTTCTGTAAAAATGCAAGAAAGCTCAAAGTTTGCAGGTACCGTCCGATTGAAGATGAATTTAATTCTCCAAATCTACCCGAGTTACAGAAGTTACTAATTGATGAGGATTACAGCATTGCTGTGGGGATTTATATTTTGGTTCGTGCTGTTGACCGGTTCGCTGCTAATTACAACACTTTTCCTGGACAGTTTGACAGTGCAATGGATGAGGATATCCCAAGATTGAAAAGCACAGCTATTAGCCTACTTAGTGACTTGGGATGCAACGGCGCCACTTTGGCTGAAGACCTTATTAATGAGATGTGTCGATTTGGCGCTGCAGAGCTTCATGCTGTTGCTGCTTTGGTTGGAGGAATTGCATCGCAAGAAGTGATCAAGCTCATAACAAGGCAATTTGTACCAATGTCCGGGACCTTCATCTTCAACGGCATCGACCATAAGTCACAGCTATTGTCATTGTAA 1572 0.4167 MAEPKVKYDRQLRIWGDQGQAALEKSSICLLNCGPTGSETLKNLVLGGVGSITVVDGSKVEVGDLGNNFMVDESSLGQSKAKCVCSFLQELNDAVKAKFVEEDPETLIETNPSFFSQFTLVVATQLVESSMIKLDRICREANAMLIFARSYGLTGFVRISLKEHTVIESKPDHFLDDLRLNNPWPELKRLAEGFDLNVQDPVAHKHIPYVVILVKMADEWAKSHGGNLPSTREEKREFKELLKAGMVAQDEDNYKEAIDASFKVFAPRGISSELQQILNDSSAEVDSSSSDFWVLVAALKEFIANEGGGEAPLEGSIPDMTSSTEQYVNLQNIYQAKAEADFLVMERLVRSSLKKIGRDPNSIPRATIKSFCKNARKLKVCRYRPIEDEFNSPNLPELQKLLIDEDYSIAVGIYILVRAVDRFAANYNTFPGQFDSAMDEDIPRLKSTAISLLSDLGCNGATLAEDLINEMCRFGAAELHAVAALVGGIASQEVIKLITRQFVPMSGTFIFNGIDHKSQLLSL* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1548 523 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 522 IPR045886 -
Lan8g1548 523 CDD APPBP1_RUB 7 521 - -
Lan8g1548 523 Pfam ThiF family 8 501 IPR000594 -
Lan8g1548 523 Gene3D - 357 523 - -
Lan8g1548 523 Gene3D - 2 262 - -
Lan8g1548 523 PIRSF APP-BP1 1 523 IPR030667 GO:0019781|GO:0045116
Lan8g1548 523 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT 2 522 - -
Lan8g1548 523 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 519 IPR035985 GO:0008641
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1548 Lan-Chr8 22512729 22519186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1548 7 78 EF-hand Containing Proteins AT2G30110 33.766 2.16e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1548 K04532 - gmx:100793799 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1548 8 22512729 22519186 Lan8g1548 8 22512729 22519186 ECH