Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1531 ATGGCTGCATCATTTTTATTGCCATCATCCGCAATGGAGGAAGAAGCCATGTTTGAAGCTGAAGTGGCAGAGGTGCAAGCATGGTGGAACTCCGAGAGGTTCAAGCTAACCCAAAGACCATACTCAGCTAGAGACGTGGTGTCCCTTCGTGGCAACCTGAGACAAACCTACGGCTCAAATGAGATGGCTAAGAAGCTATGGAGAACTCTCAAGACCCACCAGGCCAATGGCACAGCCTCAAGGACATTCGGTGCGCTTGACCCTGTTCAGGTCACACAAATGGCTAAGCACCTGGACACAATTTATGTCTCTGGGTGGCAGTGCTCATCCACTCACACCACCACCAATGAACCCGGTCCGGACCTCGCTGATTACCCTTATGACACTGTCCCTAACAAGGTTGAACACCTTTTCTTTGCTCAGCAATACCATGATAGGAAACAAAGAGAGGAGAGAATGAGAATGACCCGGGAAGAGAGGGCAAAAACCCCTTACATTGATTACTTGAGGCCTATCATAGCCGATGCTGACACTGGCTTTGGTGGCACCACAGCAACTGTTAAGCTTTGTAAGCTCTTCGTGGAGCGTGGCGCGGCCGGTATCCACATTGAGGACCAGTCTTCCGTGACCAAAAAATGTGGCCACATGGCAGGGAAAGTGCTTGTTGCAATAAGTGAACACATCAACAGGCTTGTGGCTGCAAGGTTGCAATTTGATGTCATGGGTGTGGAAACTGTTTTGGTGGCCAGAACAGATGCTGAAGCTGCAACTCTCATTCAGTCTAATATTGACACAAGGGATCATCAATTTATCTTGGGTGTGACCAACCCAAGCCTCAAGGGGAAGAGTTTAGCAACTCTCATGGCACAAGGCTTGGCTGCAGGAAAGAGCGGCGCCGAGCTTCAGGCCTTGGAGGACCAATGGCTATCAATGGCACAATTGAAGACTTTCTCAGAAGCAGTAGTGGATGCAATTAAGAGCCACAACATTAATGAGGAAGAGAAAAGGAGGAAGTTGAATGAGTGGATGATTTGTTCAAGTTATGAAAAGTGTCTTTCCAATGACCAAGTGAAAGAGATTGCTGAAAGGTTTGGGGTAAGAAACCTTTTCTGGGATTGGGACTTGCCTAGAACTAGAGAAGGGTTTTATAGGTTCAAAGGGTCAGTGCTAGCTTCAATTGTTAGAGGGTGGGCTTTTGCTCCACATGCTGATCTTATATGGATGGAAACTGCAAGTCCTAATGTAGTTGAGTGCACACAATTCGCTGAGGGGGTTAAATCAAAGTACCCGGAGATTATGCTCGGATACAATCTTTCTCCATCATTCAACTGGGATGCTTCTGGCATGAATGATGAGCAAATGAGAGACTTCATTCCTAGGATTGCAAGGTTGGGGTATGTGTGGCAGTTCATAACAGTGGGTGGTCTACACTGTAATGCACTTATCACTTCAACATTTGCAAGTGATTTTGCAAATAGGGGAATGCTGGCTTATGTGGAAAGGATTCAGAGAGAGGAAAGGAACAATGGTGTTGACACACTTGCTCACCAGAAATGGGCTGGTGCTAACTACTATGACAGGTACCTCAAAACTGTCCAGGGTGGTGTTGCATCAACTGCTGCAATGGGAAAAGGAGTAACTGAAGAGCAATTTAAAGAAACATGGACTAGGCCAGGAACTGTAGGCATTGGTGGAGGCAGTGTGGTGGTTGCTAAGGCCAGAATGTAG 1728 0.4699 MAASFLLPSSAMEEEAMFEAEVAEVQAWWNSERFKLTQRPYSARDVVSLRGNLRQTYGSNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSSTHTTTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREERMRMTREERAKTPYIDYLRPIIADADTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQSNIDTRDHQFILGVTNPSLKGKSLATLMAQGLAAGKSGAELQALEDQWLSMAQLKTFSEAVVDAIKSHNINEEEKRRKLNEWMICSSYEKCLSNDQVKEIAERFGVRNLFWDWDLPRTREGFYRFKGSVLASIVRGWAFAPHADLIWMETASPNVVECTQFAEGVKSKYPEIMLGYNLSPSFNWDASGMNDEQMRDFIPRIARLGYVWQFITVGGLHCNALITSTFASDFANRGMLAYVERIQREERNNGVDTLAHQKWAGANYYDRYLKTVQGGVASTAAMGKGVTEEQFKETWTRPGTVGIGGGSVVVAKARM* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1531 575 Gene3D - 262 377 - -
Lan8g1531 575 Pfam Isocitrate lyase family 21 551 IPR006254 GO:0004451|GO:0019752
Lan8g1531 575 Gene3D - 17 535 IPR040442 -
Lan8g1531 575 ProSitePatterns Isocitrate lyase signature. 211 216 IPR018523 GO:0003824
Lan8g1531 575 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 12 535 IPR015813 GO:0003824
Lan8g1531 575 CDD ICL_PEPM 75 257 IPR039556 GO:0003824
Lan8g1531 575 TIGRFAM isocit_lyase: isocitrate lyase 22 551 IPR006254 GO:0004451|GO:0019752
Lan8g1531 575 PIRSF ICL 368 554 IPR006254 GO:0004451|GO:0019752
Lan8g1531 575 PIRSF ICL 12 331 IPR006254 GO:0004451|GO:0019752
Lan8g1531 575 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 12 554 IPR006254 GO:0004451|GO:0019752
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1531 Lan-Chr8 22391684 22395071 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1531 K01637 - gmx:100782793 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1531 8 22391684 22395071 Lan8g1531 8 22391684 22395071 ECH
Lan7g0431 7 3067378 3071104 Lan8g1531 8 22391684 22395071 LSH