Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1525 ATGGAACCTTGCTGCAATCTTGAAGTGGATGTAAATGGAGAAGAAACTTTCATGGTGGACAAGACAATTATTGCTCAGTACTCAGGAAAATTTGCGAAATTATTTGGAAAATCTAGTGGAGCCAGAGGGAAACTCAAAGTAATATTCAATGATTTTCCAGGAGGTGCAAAAGGTTTTGAGCATATGTTAAGATTCTGTTATAACAATGGAACAACTGATTTAACTCCCTCCAATTTGTTACTCTCACGTTGTGCTGCTGAATTCATGGAAATGAAGGAATCTGTGGCTGGTGTTTCTAACTTATTGGAACAAACAGAAAAATCACTTCAAGAGATTAACTTTTGGACATGGTCAGGCCTTTTGATTGCATTGAAGCAGTGCCAGAATTTATCATTAGCTGCAAATTCTTCTATTATGCTAGAGAAATGCTTCGATACCTTAGTAGGGAGGCTAGTTTTGGCAAGTGAAACAAGCCCTTGTCCATCAACTTGTTCTACTGATAGCTCTGGAATTCGATTTTCATGTGACTCTAAAAGTACTGAGAGTATAAAGACGAATTCCGCTCGTTTAACTTGGTGGTTTGAAGATCTCCTGTTTTTGAGTCCCTTGTTGGTTGCGATGTTGGTAAAGTCAATGGTTTTCCATAAGTTAGACCATGTTGTCATTAGCAGGTTTCTGCTCTATTATCAGAAAGCAAAGTTTTCCAATGCTGCTACTGATGAGAAATGCAAGATTATAGAAATGGTCATTGATATGCATTACAATATGGATCATAATTATGTTTCTTGCAAGACTTTATTTGGGATTCTTCGGGTCACTTTGAGTTTGAATATTAGTAAATGTAGCCGGAAAAAGTTGGAGAATATGATTGGCTCTCATTTGGATCAAGCAACCTTGGACAATTTGCTTGTTCCATCTCCCCATGGAATAAGCTACTTATATGATGTGAACCTTGTTCTAAGACTTTTGAAAGCATTCCTTCGCAGAGGAACTGGTGTAGTCGCTCCTGTTCAGATGAGGAAAGTTGCTACCTTAGTAGATGTGTATATAGCAGAAATAGCTCCTGATCCTTACTTAAAAGCTTCCAAGTTCTTGGCTATTGCCACAGTACTTCCAGATTCTGCTAGAGACTCTTATGATGAGCTCTATCATGCAGTGAACATGTATCTAGAGGTACATGATCACTTGTCACAAGAAGAAAGGGTAAAGATCTGTTGTGGATTAAATTACGAGAAGCTTTCATCTCAAGCCTGTTTACACCTTTCTCAGAACTCAAAATTTCCTTCAAAATCTGCAGTTCAGGCTCTCATCTCTAAGCAATCTAAGCTCAACAACTTACTCCGTACTACTCCTAGTACAACTCCATTCAACAATTCGCCTTGCGGCTCGAGTGGTACTGCTCAAAGAGGAAAGAAAGACAAAATTAGTGAACAGGTTGTATTATATGATGGAAACATTGATCTTTCAGTTGATAATGAGAAACTCAGAGTACATTTGCAAGGAATGCAATGCAGGGTTACGGAACTCGAGAAAATCTGTCTGAAAATGCAATCTCAGATGGCAAAAATCACCAAATCAAAAGTATCAGGCTGTAGTAATGCAAGATCCTTGCCTAAACTCTGTTCATGA 1629 0.3831 MEPCCNLEVDVNGEETFMVDKTIIAQYSGKFAKLFGKSSGARGKLKVIFNDFPGGAKGFEHMLRFCYNNGTTDLTPSNLLLSRCAAEFMEMKESVAGVSNLLEQTEKSLQEINFWTWSGLLIALKQCQNLSLAANSSIMLEKCFDTLVGRLVLASETSPCPSTCSTDSSGIRFSCDSKSTESIKTNSARLTWWFEDLLFLSPLLVAMLVKSMVFHKLDHVVISRFLLYYQKAKFSNAATDEKCKIIEMVIDMHYNMDHNYVSCKTLFGILRVTLSLNISKCSRKKLENMIGSHLDQATLDNLLVPSPHGISYLYDVNLVLRLLKAFLRRGTGVVAPVQMRKVATLVDVYIAEIAPDPYLKASKFLAIATVLPDSARDSYDELYHAVNMYLEVHDHLSQEERVKICCGLNYEKLSSQACLHLSQNSKFPSKSAVQALISKQSKLNNLLRTTPSTTPFNNSPCGSSGTAQRGKKDKISEQVVLYDGNIDLSVDNEKLRVHLQGMQCRVTELEKICLKMQSQMAKITKSKVSGCSNARSLPKLCS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1525 542 SUPERFAMILY POZ domain 4 101 IPR011333 -
Lan8g1525 542 ProSiteProfiles NPH3 domain profile. 191 442 IPR027356 -
Lan8g1525 542 ProSiteProfiles BTB domain profile. 5 69 IPR000210 GO:0005515
Lan8g1525 542 PANTHER OS12G0117600 PROTEIN 11 542 IPR043454 -
Lan8g1525 542 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 11 542 - -
Lan8g1525 542 Pfam BTB/POZ domain 5 104 IPR000210 GO:0005515
Lan8g1525 542 SMART BTB_4 5 106 IPR000210 GO:0005515
Lan8g1525 542 MobiDBLite consensus disorder prediction 452 472 - -
Lan8g1525 542 MobiDBLite consensus disorder prediction 452 466 - -
Lan8g1525 542 Pfam NPH3 family 191 418 IPR027356 -
Lan8g1525 542 Gene3D Potassium Channel Kv1.1; Chain A 2 115 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1525 Lan-Chr8 22280583 22284123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1525 17 522 EF-hand Containing Proteins AT3G44820 27.208 3.23e-55 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1525 - - gmx:100784792 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1525 8 22280583 22284123 Lan8g1525 8 22280583 22284123 ECH
Lan7g0441 7 3166612 3170106 Lan8g1525 8 22280583 22284123 LSH