Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1521 ATGGCTGCTATTGGCAAAGGAGGTGTTGGTTTTGAGGACTTGCTTCCTATGATGGCAAACAAGCTTGGTGGGGAGGGTCTAATAAATGAGCTATGCAATGGGTTTGAGATGCTGATGGATAAAGACAAAGGTGTTATAACATTAGATAGTTTGAGAAAAAATGCTGCTCTTCTTGGTCTTCAAGATTTGAAGGAGGATGAGCTTGTGAGCATGATGAGAGAAGGAGATTTAGATGGAGATGGCGCTCTCACTCAAATGGAGTTTTGTGTTTTGATGTTCAGATTGAGCCCTGAGTTGATGGAAGAGTCTTGGTTTTGTGTTGAAGAGGCTTTGCAATATGAGCTCAACAATAACTCTAAATAA 363 0.4077 MAAIGKGGVGFEDLLPMMANKLGGEGLINELCNGFEMLMDKDKGVITLDSLRKNAALLGLQDLKEDELVSMMREGDLDGDGALTQMEFCVLMFRLSPELMEESWFCVEEALQYELNNNSK* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1521 120 SMART efh_1 67 95 IPR002048 GO:0005509
Lan8g1521 120 ProSitePatterns EF-hand calcium-binding domain. 76 88 IPR018247 -
Lan8g1521 120 Gene3D - 9 120 - -
Lan8g1521 120 ProSiteProfiles EF-hand calcium-binding domain profile. 63 98 IPR002048 GO:0005509
Lan8g1521 120 PANTHER CALCIUM-BINDING PROTEIN KIC 1 118 IPR044205 GO:0005509
Lan8g1521 120 Pfam EF-hand domain pair 43 94 IPR002048 GO:0005509
Lan8g1521 120 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 118 - -
Lan8g1521 120 SUPERFAMILY EF-hand 5 100 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1521 Lan-Chr8 22244751 22245295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1521 11 118 EF-hand Containing Proteins AT5G54490 63.303 7.77e-44 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1521 K24345 - gmx:100527206 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1521 8 22244751 22245295 Lan8g1521 8 22244751 22245295 ECH