Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1487 ATGCTGAAAATCTTGTACAGTAGAAGCATGGTGGCTGGAAATGGTTTGTTTTATCCCACTTTCGGTTTTGCATCGCTTATATTTTTCACTTACATGTCTTTTGGAGACATAAGGTTTGGTTTTGAGGAAGAACCTGAGTTGAGTTTTGTGGAGAGAAATGGGACTCAGTTTGTGTCGGATGGGAAAACTTTCTACATTAATGGGTGGAACTCTTATTGGTTAATGGTTCAATCTGTGGATGATTATTCCAGGCCTAGGGTTCATGAAATGTTGAAAGGCGGGGCCAAGATGGGCCTCACTGTTTGTAGAACTTGGGCATTCAATGATGCTGACTATAATGCCCTTCAGGTTTCACCTGGTGTATACAATGAACAAGCTTTCAAGGCCTTGGACTATGTTATATCAGAAGCAAGGCAACATGGAATTAGGCTTCTTCTTAGCTTAGTAAATAACTTGCAAGCTTATGGTGGGAAGACTCAGTATGTCAAATGGGCATGGCAAGAAGGTGTAGGGTTAAGCGCTTCTAATGATTCTTTCTTCTTTGATCCATCAATCCGAAGTTATTTCAAGAATTACGTCAAGACTATTCTAACAAGGAAGAATACTATTACTGGAATTGAATATAGAAATGACCCTGTCATTTTTGGTTGGGAATTAATTAATGAGCCTCGATGCATAACCGATCCTTCAGGCGACACACTCCAAGATTGGATAGAAGAAATGTCAGCTTTTGTAAAATTGATTGACAAAAACCATTTGGTGACTGTTGGACTTGAAGGATTTTATGGTCCTAATGACCCGAAAAGATTAACAGTCAACCCTGAGGCATGGGCATCCAGACTTGGATCTGATTTTATTAGGAACTCTCAAGTCTCAAATATTGATTTCACCTCTGTTCATATATACCCTGACCATTGGTTTCATGAGCAAGGGGTCGAAGATTATATTAAATTTGTGTCCAAGTGGATGCTTTCTCACATTGAAGATGGTGACAAGGTATTGAACAAGCCTGTCTTGTTCTCTGAATTTGGATTATCAGACACTATCAAGAACTTTTCTTTGTCCGACCGAGAAAAGATGTATAAAACAATTTTAGACATAACCTACAAATCTGCTAAGAAGAACAAGTCTGGAGCAGGCACTTTAGTTTGGCAATTCTTAGTTGGGGGAATGAACGAATTCATCGATGATTTTGGGATTGTTCCATGGGAAAGGCCATCAACCTTTTCTCTATTCATTGAACAATCATGCAGATTAGCCAAATTCAATGGTTTGTCTGAACAGAACATAAGGTTCAAAGAATATTGTTAG 1311 0.3875 MLKILYSRSMVAGNGLFYPTFGFASLIFFTYMSFGDIRFGFEEEPELSFVERNGTQFVSDGKTFYINGWNSYWLMVQSVDDYSRPRVHEMLKGGAKMGLTVCRTWAFNDADYNALQVSPGVYNEQAFKALDYVISEARQHGIRLLLSLVNNLQAYGGKTQYVKWAWQEGVGLSASNDSFFFDPSIRSYFKNYVKTILTRKNTITGIEYRNDPVIFGWELINEPRCITDPSGDTLQDWIEEMSAFVKLIDKNHLVTVGLEGFYGPNDPKRLTVNPEAWASRLGSDFIRNSQVSNIDFTSVHIYPDHWFHEQGVEDYIKFVSKWMLSHIEDGDKVLNKPVLFSEFGLSDTIKNFSLSDREKMYKTILDITYKSAKKNKSGAGTLVWQFLVGGMNEFIDDFGIVPWERPSTFSLFIEQSCRLAKFNGLSEQNIRFKEYC* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1487 436 Pfam Cellulase (glycosyl hydrolase family 5) 82 385 IPR001547 GO:0004553|GO:0071704
Lan8g1487 436 SUPERFAMILY (Trans)glycosidases 48 410 IPR017853 -
Lan8g1487 436 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 13 436 - -
Lan8g1487 436 Gene3D Glycosidases 46 423 - -
Lan8g1487 436 PANTHER - 13 436 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1487 Lan-Chr8 21957659 21963908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1487 12 436 Glycoside Hydrolase AT2G20680 68.941 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1487 K19355 - gmx:100811461 765.377