Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1445 ATGGCCCAGTTATTATCTCCGGTGTATACAGAAGCTCTCAAAATCCATAATCCATCACTGAGTTTTTGTTCATGGAGGATGTTACCAAAGGCTGCAAGTTCTTGGAATTTTGCCACACACAGTGCCAAGAGAAGAGGATTTGGCAGAGTAAGAGTTACTTCTGCTGAAGACTCATTTTCTCCCACTGATACTGTTGCAGATGATTATTATGCAGTTCTGGGTCTGCTTCCAGATGCCACACCAGCGCAGATCAAGAAGGCCTATTACAATTGCATGAAAGCATGCCACCCTGACTTGAGTGGCAATGATCCCGAAACCACGAATTTCTGCACCTTCATCAATGAAGTCTATGCGGTGCTTAGTGATCCTGTTCAGCGCATGGTTTATGATGAAATTCATGGGTATTCTTTGACATCAATCAATCCTTTCCTTGATGATTCTAGCTCAAAGGATCATGTTTTTGTTGATGAATTCAGTTGCATAGGTTGCAAAAATTGTGCCAATGTAGCCCCTGATGTGTTTGCAATAGAAGAAGACTTTGGTAGAGCCAGAGCATACACCCAATGCGGGAAATCTGAATTAGTTGAACAGGCGATTGAGAGTTGCCCTGTTGACTGCATTCATTGGACATCGGCTGCACAACTATCATTACTCGAAGATGAAATGCGTCGGGTAGAAAGAGTCAATGTTGCCTTGATGCTTTCAGGCATGGGAGCAGCATCAAACGATGTTTTCAGAATGGCAAGTTCCCGATGGCAAAAGAGGCAGTCAAAAGTTTTGGAACAAGCAAAATTAAGGATGATGAAGCAGAATGGTTCCAACAACACAGATTCATACTGGGACAATCTTTGGGGAAAGCCAAAAGAATACCAAAGTTCAGAGGAGGAAGTGAATGAAAGAGCAAAAAGAGCTGCTGCTGCTGCTAGAAGATGGAGAGAGTACTCAAGGAAGGGTGTTGATAAGCCTCCTACATTTAAACTTCCAGAGGGAGCCTCCACCAACAAGGACAACTGA 1014 0.4339 MAQLLSPVYTEALKIHNPSLSFCSWRMLPKAASSWNFATHSAKRRGFGRVRVTSAEDSFSPTDTVADDYYAVLGLLPDATPAQIKKAYYNCMKACHPDLSGNDPETTNFCTFINEVYAVLSDPVQRMVYDEIHGYSLTSINPFLDDSSSKDHVFVDEFSCIGCKNCANVAPDVFAIEEDFGRARAYTQCGKSELVEQAIESCPVDCIHWTSAAQLSLLEDEMRRVERVNVALMLSGMGAASNDVFRMASSRWQKRQSKVLEQAKLRMMKQNGSNNTDSYWDNLWGKPKEYQSSEEEVNERAKRAAAAARRWREYSRKGVDKPPTFKLPEGASTNKDN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1445 337 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 336 - -
Lan8g1445 337 PRINTS DnaJ domain signature 70 88 IPR001623 -
Lan8g1445 337 PRINTS DnaJ domain signature 88 103 IPR001623 -
Lan8g1445 337 PRINTS DnaJ domain signature 105 125 IPR001623 -
Lan8g1445 337 PANTHER OS01G0730500 PROTEIN 1 336 - -
Lan8g1445 337 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Lan8g1445 337 Pfam 4Fe-4S single cluster domain of Ferredoxin I 155 209 - -
Lan8g1445 337 SMART dnaj_3 67 125 IPR001623 -
Lan8g1445 337 Gene3D - 151 211 - -
Lan8g1445 337 Gene3D DnaJ domain 53 144 IPR036869 -
Lan8g1445 337 Pfam DnaJ domain 68 130 IPR001623 -
Lan8g1445 337 CDD DnaJ 68 122 IPR001623 -
Lan8g1445 337 SUPERFAMILY 4Fe-4S ferredoxins 152 209 - -
Lan8g1445 337 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 151 179 IPR017896 -
Lan8g1445 337 MobiDBLite consensus disorder prediction 311 337 - -
Lan8g1445 337 PRINTS 3Fe-4S ferredoxin signature 155 166 IPR001080 GO:0005506|GO:0009055
Lan8g1445 337 PRINTS 3Fe-4S ferredoxin signature 166 176 IPR001080 GO:0005506|GO:0009055
Lan8g1445 337 PRINTS 3Fe-4S ferredoxin signature 195 207 IPR001080 GO:0005506|GO:0009055
Lan8g1445 337 SUPERFAMILY Chaperone J-domain 68 158 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1445 Lan-Chr8 21578130 21582181 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1445 - - vra:106778489 546.199