Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1437 ATGGCTCCCGTTGCTCCTCGATCTGGAGATGCAATATTCGCAAACGTCGAACGCGTGAACGCGGAACTGTTTACTTTGACGTATGGTGCGATCGTGCGTCAATTGCTCACCGATTTGGAAGAAGTTGATGAGGTTAACAAGCAGCTTGATCAAATGGGTTATAATATTGGAATCCGTTTGATTGATGAGTTTTTAGCTAAATCTAATGTATCAAGATGCGTTGATTTCAGAGAGACAACTGATGTAATTGCAAAGGTTGGTTTTAAAATGTTCCTTGGTGTTACTGCATCTGTGGCCAATTGGGATGCTGATGGGACATGTTGTAGTATTATTTTGGAGGATAATCCTTTGGTAGACTTTGTTGAGCTTCCTGACAACTGTCAAGGTCTTTACTATTGTAACATCCTAAGTGGAGTCATTAGAGGAGCCTTAGAGATGGTGTCAATGAAAACCGAGATCACTTGGATCCGTGATGTGCTTCGGGGTGATGATGCGTTTGAGTTGCAGGTAAAACTTCTCAAGCAAGTTCCAGAAGAATATCCATACAAGGATGATGAGTGA 561 0.4189 MAPVAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRLIDEFLAKSNVSRCVDFRETTDVIAKVGFKMFLGVTASVANWDADGTCCSIILEDNPLVDFVELPDNCQGLYYCNILSGVIRGALEMVSMKTEITWIRDVLRGDDAFELQVKLLKQVPEEYPYKDDE* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1437 186 Pfam Transport protein particle (TRAPP) component 24 171 IPR007194 -
Lan8g1437 186 CDD TRAPPC3_bet3 20 174 IPR016721 GO:0030008|GO:0048193
Lan8g1437 186 PANTHER PROTEIN PARTICLE COMPLEX SUBUNIT, PUTATIVE-RELATED 1 186 - -
Lan8g1437 186 PIRSF TRAPP_1_Bet3 3 185 IPR016721 GO:0030008|GO:0048193
Lan8g1437 186 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 1 186 IPR016721 GO:0030008|GO:0048193
Lan8g1437 186 Coils Coil 32 52 - -
Lan8g1437 186 SUPERFAMILY Ligand-binding domain in the NO signalling and Golgi transport 18 176 IPR024096 -
Lan8g1437 186 Gene3D Trafficking protein particle complex subunit 3 3 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1437 Lan-Chr8 21514028 21516417 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1437 K20302 - jre:108993490 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0550 7 4153087 4155852 Lan8g1437 8 21514028 21516417 LSH