Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1435 ATGCGTGCCTCCATCACCAGAAGGAACCTATGCACTCTCAGCACCATTCTCCGTTCTCATTCAATTCCCAAACCCATCAATCATGACTTCGTTTCTGAACTCAATCTCTCTCTCCTCAACTTCAATTCTTCTTCTCCCCAAGAGGATTTGTCTAACGAGAGCACTACTACGCAGCTTTCTTCTATATTGTACTCTCCATCAAGAGAACGTGCTGGTCCTCAGGAAACTGATGACAGTGAAGAAAAAAGGAAAAGTGCATTAGATATTCCTTGGCTTACAGACCGGCTTGATGGTGATTTTTCACACAAACGGAAAGAGACATCGCGTGAGAGGAAGCATAAATGCATTTTTAAATTCTCAGGCGATGGCCGTTTTGATAGAGTAGCTGACATGTGCAGCCAAAAACTAGGAACAGGAGCTACCCTTGATGTATTTAGTAAGCTGGGTCGAGCAACAGGTGTGAAAGAGTACAATGCATTGATAAAGGTGTGCATAAAAAATGCTAGGGGAACAGATGACGAATGTGTTGCTGTTGACGAAATAGTGAAGGCCTTTCACATTTTCAAATCAATGAGGGAACGTGGTTTTCCACTAGAAGAGCAAACATATAGCCCAGTTCTTCGGTATTTAAATGACATGGGTTTTGTTCGGGAATTCGAACTTTTCTCTAATGTTATCAAAGCCGAGAGTCCCAATTCGGCTTCACGATTAGGTTACTATGAAATGATGTTGTGGATAAGAGTTAGCAATGAAGAAATGATTCAGGACATCTGTGAATATATTACAGTTGAAAATAGTGAAGACACTTCTGCTTTACGAGAAAGTTACTTATTGGCTCTTTGTAAAAGTGACCGGAAGACACAGATTATGGATGTGTTGAAAAATCTAGACATAACTAAGTTATCATCTTCAAAATCTATAGCAAGTGTATTCCAATCGTTAGGCTGGCTACAGCAGAAATCTTTTGCAGAAAATTTACTTTTGGATTTGAGAGCGCGCGATCACAATTCAGATGATATTTCAGAGTTCATTGTTAGTTATGCTATTAGCATTCCAAATTTAGTGGTGGATGATATCGTCTCAGATGTCAACGATTTGCACCTACTATTGGAAGTTCTACCTTCAACCTCATCATATGAAATGCTCATCACGTATTGCTGTGGCATACGCAAGGCAGAAGCAGCTCTTAATATTGTTGATAAAATGTGTGAAGCAGGCCATACCTCTAAAACTGCAGTTTTACAGTCCATATTACAAATTTGTACGGAAACATATGAATATAGTTTGGTCTATCGAATATATTCCATCATATGCCGCTACAATTTCGATATGAATGACGAAATATGCAGGTGTTTGGTACACTTTTGCGTAAGGATGAAAGATTTTGAAGGTGCATACAAAATGGTTGATGACTTAGAGAAAATGAATTTCAAACCTACGACGGCAATGTACAATGCTATAATGGCAGGATATTTTCGAGAGAAAAACATCAGTGGCGGGTTGAGGGTCCTCAAGCACATGCAAAGTGCCAATGTAAAACCTGATTCACAGACTTTTGGCTATTTAATTGGCAACTCTGAAACAAAAGAGGATATAATCAAGTATTATGAAGAGATGAAGCAATCTGAAATCAAACCGACAAAGCATATTTATATGGCCCTTGTTAATTCATACGCAGCTTGTGGCGAATTGGAGAAGGCAAAACAGATCGTTGCAGACCCAAAGATATCAGTTAAGATTTTAAATGAAATCAAGAGTGTCCTTGTCTCAGCTCTTGCAACACATGGGAAATTGTCTGAGGCACTTCTTGTGTATGAGGAGATTAAGAATGCTGGACACAACTTGGATCCAAAAGCTATTATGAATCTCATTGACGAAATCACTCAATTTGAAGGAGAGTTGGATGGTTTGCTTGTGCTACTTAATGAATTGAGTGATCGAAACTATTGGGTTGAAGGTTGCTTCAGAATTATCATGTATTGTGTTCAGAACAAGAATTTAAGTGGTGCTATTAAATTGTTCAAGCAACTCAAGAGTATGTTCGAAAGTGATGAATTAGTAATGGAAGCTCTCTTTGACGCGGTATTTTCCTTAATCGCCGAGTCGCAGTCCACACATTTACAGATTGGCTTGGACTTGCTTTGGGCAATCAAGGATGAACTCAGCCTTGTGCCTTCACGGCAATGTCTTGATTTTCTTCTAACCAGTTGTGCCAATGCTGGAGATTTGAATAATGCTCGCTTGATTTGGAGAGAATATGAGGTTGCTGGATATCCTTACAATGTATTAAGTTACTTGAGGATGTATCATGCACTTTTGGCTTCAGGAGATCATAGATCTGCTAACATTATGCTCAAGAAAATTCCGAAAAATGACACCGATGTTTGTTGTATGATCAAAGCATGTCAAGATAAGTACCATGAAGATCCTAACTCTGTAGAAACAAAGATAAAGAAAGGGAAGACAAAGAAAGAAAAGAGGGAGACTTGA 2490 0.3888 MRASITRRNLCTLSTILRSHSIPKPINHDFVSELNLSLLNFNSSSPQEDLSNESTTTQLSSILYSPSRERAGPQETDDSEEKRKSALDIPWLTDRLDGDFSHKRKETSRERKHKCIFKFSGDGRFDRVADMCSQKLGTGATLDVFSKLGRATGVKEYNALIKVCIKNARGTDDECVAVDEIVKAFHIFKSMRERGFPLEEQTYSPVLRYLNDMGFVREFELFSNVIKAESPNSASRLGYYEMMLWIRVSNEEMIQDICEYITVENSEDTSALRESYLLALCKSDRKTQIMDVLKNLDITKLSSSKSIASVFQSLGWLQQKSFAENLLLDLRARDHNSDDISEFIVSYAISIPNLVVDDIVSDVNDLHLLLEVLPSTSSYEMLITYCCGIRKAEAALNIVDKMCEAGHTSKTAVLQSILQICTETYEYSLVYRIYSIICRYNFDMNDEICRCLVHFCVRMKDFEGAYKMVDDLEKMNFKPTTAMYNAIMAGYFREKNISGGLRVLKHMQSANVKPDSQTFGYLIGNSETKEDIIKYYEEMKQSEIKPTKHIYMALVNSYAACGELEKAKQIVADPKISVKILNEIKSVLVSALATHGKLSEALLVYEEIKNAGHNLDPKAIMNLIDEITQFEGELDGLLVLLNELSDRNYWVEGCFRIIMYCVQNKNLSGAIKLFKQLKSMFESDELVMEALFDAVFSLIAESQSTHLQIGLDLLWAIKDELSLVPSRQCLDFLLTSCANAGDLNNARLIWREYEVAGYPYNVLSYLRMYHALLASGDHRSANIMLKKIPKNDTDVCCMIKACQDKYHEDPNSVETKIKKGKTKKEKRET* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1435 829 MobiDBLite consensus disorder prediction 45 84 - -
Lan8g1435 829 Pfam PPR repeat 587 612 IPR002885 -
Lan8g1435 829 PANTHER OS02G0132600 PROTEIN 55 820 - -
Lan8g1435 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 480 514 IPR002885 -
Lan8g1435 829 TIGRFAM PPR: pentatricopeptide repeat domain 483 516 IPR002885 -
Lan8g1435 829 TIGRFAM PPR: pentatricopeptide repeat domain 448 480 IPR002885 -
Lan8g1435 829 Gene3D Tetratricopeptide repeat domain 528 653 IPR011990 GO:0005515
Lan8g1435 829 Gene3D Tetratricopeptide repeat domain 655 829 IPR011990 GO:0005515
Lan8g1435 829 Gene3D Tetratricopeptide repeat domain 375 527 IPR011990 GO:0005515
Lan8g1435 829 Gene3D Tetratricopeptide repeat domain 124 344 IPR011990 GO:0005515
Lan8g1435 829 Pfam Pentacotripeptide-repeat region of PRORP 376 518 IPR033443 -
Lan8g1435 829 MobiDBLite consensus disorder prediction 45 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1435 Lan-Chr8 21491724 21505482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1435 344 644 Glycosyltransferase AT1G05670 21.359 2.87e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1435 - - cam:101502375 1085.86