Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1433 ATGTTTGAATTCAAAGATTGTGTATTTGAATATTCGGTGTTGAACCCTTTATTGTTGTTGTTGTGGGTAGCTGTTGTTTTCATCTCTTTGATTCTTGGGATGAGTAACAACAATGATGGCCATAAACAGCAACACCTCCATGGAGGTGTTGGTAATGGTGTCAGAGCCAACAGCAACAATAACAGATTTCTTCCTGGCTCCTTCCGCGCTTTCTCCAACTACCTGAAGGTGGTTTCCTCTGGTGCCTCCACTGTTGCTCGGTCCGCAGCAGCCTCCGCTGCCTCGGTTGCATCAGCCATTGTGGATAGGGATGGTGATGCTGACCATAATCAGGTTATATGGGCTGGGTTTGACAAATTAGAGGGTGAAGGAGGAGTCGTTAGGCAAGTCCTTCTTCTAGGATATCGGTTTGGCTTCCAAGTTTGGGATTTTGATGACTCAAATAATGTCCGTGACCTAGTTTCCAGACAGGATGGTCCTGTTTCTTTTATGCAAATGGTACCGAGTCCAATTGTATCAAAGAGACCTGAAGACAAGTTTGCAGGCAGGCGCCCATTGTTGGTAGTTTGTACAGATGGTTTCTTTGCTGGAGGAGGCAATGTTCAAGATGGTGTGACTCCCCCTTCTAATGGGGGTACAGCAAACTACCAAGAACAAGTAAATGGAAACTATCTACCAACTACTGTTCACTTTTATTCTATGAGGACCCAATCATATGTTCATGTACTAAAGTTTAGATCGGCTGTCTATTCTGTAAGATGCAGTTCTCGAATAGTTGCTGTTTCTCAAACCACTCAGATACACTGTTTTGATGCCACAACATTAGAGAGGGGATATATTTTATGTACCAATCCTATAGTCTTGAGTTGTCCTAGTTTTGGAGGCATTGGCTATGGACCACTTGCAGTAGGTCCTAGATGGCTGGCTTATAGTGGCAGCCCAGTTGCAGTTTCCACTTCTGGGCGTGTCAGCCCACAACATTTGACACCTTCTGCAAGCTTTCCTGGTTTTTCTTCAAATGGGAGCTTGGTTGCACACTATGCTAAAGAGTCTAGTAAGCATCTTGCTTGCAGGATTGTTACCCTCGGTGATATGGGGTATAAGAAACTTTCTAGATACTGCTCGGAGCTTCTCCCTGACAGCAATGATTATTTACAACATGTAAATTCTGCCTCGAGGAGTAATGGGGTCAGTAATGGCCATTCACCTGATGTGGATGATATTGGAATGGTCATTGTAAAAGATATAATCAGTAAAAACATTGTTTCCCAGTTCAGGGCCCACAAGAGTCCTATTTCAGCCTTGTGCTTTGATCCTAGTGGCACCATATTAGTGACTGCTTCTGTTCAGGGGCATAACATTAATGTTTTTAAGATAATGCCTGGATGTGATATTTTGTCAGCATCTGATGCTAGCCCTTCTCATGTTCATCTCTACAGGCTGCAACGCGGTTTTACTAATGCGGTTATACAAGATATCAGTTTTAGTGTTGACAGCAAGTGGATAATGATTAGTTCCTCAAGGGGCACTAATCATCTATTTGCTATAAATCCTCAAGGAGGACCTGTAAATATCCAGCCATATGATGATAGTTTTACTGCAAACAATGGTGGATCGGGTGTTATGACTAATCAAGCAGTTCACTGCCCCGTACAAACTTATAAACAGCAAAGCCTCTGTGCTGGTGGCCCTCCGATCACACTTTCTGTTGTAAGCAGAATTAGGAGTGGATCTAATGGCTGGAGAGGCACTGTAACTGGTGCTGCTGCAGCTGCGACAGGTAGGATGAGTTCTCTTTCTGGGGCTGTTGCTTCGTCTTTCCATAATTTCAAAGGTAGCAGTGCCTTGTATGTTGAAGGAAACCATTCCATGGAAAAGTATTACCTGTTGGTGTTTTCACCCAGTGGTTCTATGATACAATATGCTCTGCATTTACAGACCTTTAATGGTCTAGATTCAGTTGTAGTTTCTGGATTAGCACCTGCTTATGAAGCGGCTCCACAAACTGATCCAAGAGTAATAGTTGATGCTGTCCAGAAATGGAATATAAGTAAGAGAAATAGTTGGAGACAGCAAGCAGATAATATTGACATATATGGAGAGAATGGAATTTCTGACTGCAATAAAATATATCCAGAGGAAGAGAAGGGTGATAATATCACTACCCCTAAAATCAAGAATGTCCTGAAAGTGAATTCCCGTCCTAAGGTAAAGCATAATTTGTATATTTCAGAAGCGGAACTGCAAATGCATGAAGCTGGTACTCCATTGTGGGCGAAGGCCGAGATATATTTTCATTCAATGGGTAAAGAGGCTATCATGATGATGAATAAGGAAGCTGCTTCAGGAGGGGAAACTGAGATTGAAAGGATTCCAACTCGCATGATTGAAGCTAGACCAAAAGACTTGGTTCCAATTTTTGACTATATACAGACCCCAAAATTTCAGCATACAAGGACTCCTGCCGTGGATAACAAGTTAGATGAGCAAATGTTGCATCAAAGTTCTGGATTGTTCGAAAGGGGCAGCTCTTCACCAAGTAGTATTTTTGGATCTCCTGAGTATATGATTACATCTAATGGTGCTATTGATGAATTTAAAAGTGGGTTTGAAGGAAATGAGTGGGATGATCATTTGATTCTAGCAGAAACAAAGGGCTTTGTGAATAACAATGACACCCTTAAACCAAAGACTATTCATGAGATTGTAGATAATAAAATAGAGCACTTAAACATGGAGGCTCAACTCATGTTTGTAAATAGTGACAATGAAAGCCTGAAAATGAAGAATCCCTTTGAAGAAAAAGGAGATGAATCTGATTAA 2823 0.4169 MFEFKDCVFEYSVLNPLLLLLWVAVVFISLILGMSNNNDGHKQQHLHGGVGNGVRANSNNNRFLPGSFRAFSNYLKVVSSGASTVARSAAASAASVASAIVDRDGDADHNQVIWAGFDKLEGEGGVVRQVLLLGYRFGFQVWDFDDSNNVRDLVSRQDGPVSFMQMVPSPIVSKRPEDKFAGRRPLLVVCTDGFFAGGGNVQDGVTPPSNGGTANYQEQVNGNYLPTTVHFYSMRTQSYVHVLKFRSAVYSVRCSSRIVAVSQTTQIHCFDATTLERGYILCTNPIVLSCPSFGGIGYGPLAVGPRWLAYSGSPVAVSTSGRVSPQHLTPSASFPGFSSNGSLVAHYAKESSKHLACRIVTLGDMGYKKLSRYCSELLPDSNDYLQHVNSASRSNGVSNGHSPDVDDIGMVIVKDIISKNIVSQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKIMPGCDILSASDASPSHVHLYRLQRGFTNAVIQDISFSVDSKWIMISSSRGTNHLFAINPQGGPVNIQPYDDSFTANNGGSGVMTNQAVHCPVQTYKQQSLCAGGPPITLSVVSRIRSGSNGWRGTVTGAAAAATGRMSSLSGAVASSFHNFKGSSALYVEGNHSMEKYYLLVFSPSGSMIQYALHLQTFNGLDSVVVSGLAPAYEAAPQTDPRVIVDAVQKWNISKRNSWRQQADNIDIYGENGISDCNKIYPEEEKGDNITTPKIKNVLKVNSRPKVKHNLYISEAELQMHEAGTPLWAKAEIYFHSMGKEAIMMMNKEAASGGETEIERIPTRMIEARPKDLVPIFDYIQTPKFQHTRTPAVDNKLDEQMLHQSSGLFERGSSSPSSIFGSPEYMITSNGAIDEFKSGFEGNEWDDHLILAETKGFVNNNDTLKPKTIHEIVDNKIEHLNMEAQLMFVNSDNESLKMKNPFEEKGDESD* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1433 940 Gene3D - 128 536 IPR015943 GO:0005515
Lan8g1433 940 SMART WD40_4 236 271 IPR001680 GO:0005515
Lan8g1433 940 SMART WD40_4 418 458 IPR001680 GO:0005515
Lan8g1433 940 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 49 905 - -
Lan8g1433 940 SUPERFAMILY WD40 repeat-like 226 517 IPR036322 GO:0005515
Lan8g1433 940 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 49 905 IPR045142 GO:0006914
Lan8g1433 940 Pfam Breast carcinoma amplified sequence 3 563 805 IPR022175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1433 Lan-Chr8 21469454 21476108 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1433 - - var:108340445 1216.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1433 8 21469454 21476108 Lan8g1433 8 21469454 21476108 ECH