Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1401 ATGGCGTTTTCTCTCTCTTCCTCTCTCATCTCAACACTCTTTCCCTCTCTTCCTTCTTTCTTTCGCACCAACCACCCTCCACCCCCTTCAACAATCACTTCCTTCTCTAAAAAGCTGCATGAGCTTGTAATCCAACAGCATGAGGTGTCAAAAGCGATTATTGAACCCAGAATGAAGCAATTGAAGACTTTAATTCCAATGGTACTTGTCTCAGTTCAGATTACATTTTTGCTTCCTTTGGTTGATTCTTCATCAGATTCATGGTCCTATATAACTCCTCCTGCGAGAGCAGTTCTGTATTCCCCTGATACAAAAGTTCCCAGAACTGGAGAAGTTGCTCTCAGAAAATCTATACCTGCTAACCCTAACATGAAGGCTATTCAGGACTCACTTGAAGATATTTCGTACTTGTTGAGGATTCCACAGAGAAAACCTTATGGGACAATGGAAGGGAATGTGAAGAAAGTTTTGAAGATAGCGGTAGATGAAAAAGATGCTATATTGGCGAGTATACCACCAGAACTGAAGGAAAGGGGCTCTTTGGTACATGCATCTCTAATAGATGGAAAGGCTGGGTTGCAAGCTCTTCTTCAATCTATAAAGGAACAGGATGCAGATAAAGTGTCTGTTAGCCTTGCATCGACACTGGATACTGTCGCAGAGCTAGAGTTATTACAAGCACCAGGATTATCTTTTCTGTTGCCTAAGCAATACATGCAATATCCACGGCTTTCAGGGAGAGGAACTGTCGAGTTCACCATTGAGAAAGGTGATGGTTCAACATTTTCTCCAGTTCGTGGTGAAGAAAGAAAAACTGCCACCATTCAGGTTGTTATAGACGGATACTCAACTCCATTAACAGCTGGGAATTTCGCAAAATTGGTGATGGATGGAGCATACAATGGCATAAAACTCAACTGTATCAACCAAGCAATTATCTCAGATAATGGGCTTGATAAGAACAGTGGTTACAGTGTTCCCTTGGAGATAATGCCCTCTGGACAATTTGAGCCCCTTTACAAAACAAAATTGAGTGTGCAGGATGGAGAACTGCCAGTCCTTCCTCTATCTGTTTATGGGGCAGTTGCTATGGCCCATAATGAAGACTCCGAGGAGTATTCATCACCTGATCAGTTTTTCTTCTATCTTTATGATAAACGAAGTGCTGGCTTGGGAGGAATATCATTTGATGAGGGACAGTTTTCAGTTTTTGGATACACAACTATTGGGAGAGATATCCTCCCGGAGATAAAAAGTGGTGATGTTATTCGTTCTGCAAAGCTTATTGAAGGCCAAGATCGCCTTGTATTGCCTAAAGAAAGTTGA 1326 0.4186 MAFSLSSSLISTLFPSLPSFFRTNHPPPPSTITSFSKKLHELVIQQHEVSKAIIEPRMKQLKTLIPMVLVSVQITFLLPLVDSSSDSWSYITPPARAVLYSPDTKVPRTGEVALRKSIPANPNMKAIQDSLEDISYLLRIPQRKPYGTMEGNVKKVLKIAVDEKDAILASIPPELKERGSLVHASLIDGKAGLQALLQSIKEQDADKVSVSLASTLDTVAELELLQAPGLSFLLPKQYMQYPRLSGRGTVEFTIEKGDGSTFSPVRGEERKTATIQVVIDGYSTPLTAGNFAKLVMDGAYNGIKLNCINQAIISDNGLDKNSGYSVPLEIMPSGQFEPLYKTKLSVQDGELPVLPLSVYGAVAMAHNEDSEEYSSPDQFFFYLYDKRSAGLGGISFDEGQFSVFGYTTIGRDILPEIKSGDVIRSAKLIEGQDRLVLPKES* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1401 441 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 274 424 IPR002130 GO:0000413|GO:0003755
Lan8g1401 441 Gene3D - 120 225 IPR023222 -
Lan8g1401 441 Gene3D - 263 433 IPR029000 -
Lan8g1401 441 SUPERFAMILY Cyclophilin-like 274 425 IPR029000 -
Lan8g1401 441 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC 46 440 IPR044259 -
Lan8g1401 441 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 262 441 IPR002130 GO:0000413|GO:0003755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1401 - - aip:107630088 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1401 8 20877749 20882664 Lan8g1401 8 20877749 20882664 ECH