Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1368 ATGGGTCGCCCACCCAGCAATGGAAGCCCCGCTTTTCGTTTCATTCAGTCCGAGGTTGCTGAAATGGAAACTATTCTGCAAGAACACAACAATGCAATGCCAGCACATGATGTTCTTCAAGCTCTTGCTGATAAGTTCAGTGAATCACCAGACCGTAGAGGGAAGATTACAGTGCAGATGAAGCAGGTTTGGAATTGGTTTCAAAATAAGCGGTATTCTATAAGGGCAAAATCAAGTAAGACTCCTGGAAAGTTAAGTATCTCGACTATGACTCGGGATGATTCGGCTCCACCGAGGACTATGCCTCCACCAACCACTGCTCCAACTCCTGGTGCTTCAGGTTCAGTTCCGCCAACAGGAAAAACAATCCCAGAAAGTTCGGTTATGGAATTTGAAGCTAGATCTGGAAGAGATGGAGCGTGGTATGATGTGGCTAGTTTCCTATCTCTCAGATATTTGGAGACCAATGATCCGGAAGTACTAGTACGGTTTGCTGGTTTTGGACCAGATGAAGATGAGTGGATAAATATCCGAAAAAATGTCAGGCCACGCTCTTTGCCATGTGAATCATCAGAATGTATTGTGGTTCTTCCTGGTGATCTCATACTCTGTTTTCAGGAAGGTAGAGAGCAAGCCCTTTACTTTGATGCCCATGTGCTTGATGCTCAAAGACGGAGGCATGATGTAAGAGGCTGTCGCTGTAGATTTTTGGTTCGTTATGATCATGACCAGACAGAGGAAATTGTGCCACTTAAGAAGATTTGTCGAAGGCCTGAAAGTGAATACAGGTTACATCAACTCAAAACTGCGAATGAGGCAGCACCCGAGGATCAGCAGAAGACTGCCATGGATCCAGCAAATGTTCATCCTACCAGGGTTACTGGTTCTTCTGAAACAGCACCAAAGCAGCATCAGAATGTGAACATTCCTATCACAACACCAGTGCCACAATTAAATGTTCCTCAAGTCTCACAGATTATGAATCTGGATCCAAAGAAACCTGAAACAGCACCAAAACAGCAACATGCAAACATTCCATTCGTAACACCCATTTCGCAGACAAATCTTTCTCCAGTCCCATGTGTGATGAATGTTGAGCCGAAGAAAGCTGAAGCAGCTCCTACTGTTCTATCTGGAAACGACTCCATCATCCCCCCTGGCTTTGGTGGCCCAATTGTTACTACAAGCAGTGTTCCTGAAGTCCCCAGTCAGAACATGGCTGAAGGAAAGTAA 1233 0.4517 MGRPPSNGSPAFRFIQSEVAEMETILQEHNNAMPAHDVLQALADKFSESPDRRGKITVQMKQVWNWFQNKRYSIRAKSSKTPGKLSISTMTRDDSAPPRTMPPPTTAPTPGASGSVPPTGKTIPESSVMEFEARSGRDGAWYDVASFLSLRYLETNDPEVLVRFAGFGPDEDEWINIRKNVRPRSLPCESSECIVVLPGDLILCFQEGREQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQTEEIVPLKKICRRPESEYRLHQLKTANEAAPEDQQKTAMDPANVHPTRVTGSSETAPKQHQNVNIPITTPVPQLNVPQVSQIMNLDPKKPETAPKQQHANIPFVTPISQTNLSPVPCVMNVEPKKAEAAPTVLSGNDSIIPPGFGGPIVTTSSVPEVPSQNMAEGK* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1368 410 MobiDBLite consensus disorder prediction 97 111 - -
Lan8g1368 410 MobiDBLite consensus disorder prediction 269 300 - -
Lan8g1368 410 MobiDBLite consensus disorder prediction 77 123 - -
Lan8g1368 410 SUPERFAMILY Homeodomain-like 15 78 IPR009057 -
Lan8g1368 410 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 352 IPR039276 -
Lan8g1368 410 MobiDBLite consensus disorder prediction 387 410 - -
Lan8g1368 410 MobiDBLite consensus disorder prediction 77 95 - -
Lan8g1368 410 Gene3D - 9 84 - -
Lan8g1368 410 Gene3D - 188 260 - -
Lan8g1368 410 Gene3D - 126 187 - -
Lan8g1368 410 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 352 - -
Lan8g1368 410 MobiDBLite consensus disorder prediction 396 410 - -
Lan8g1368 410 Pfam SAWADEE domain 129 255 IPR032001 GO:0003682
Lan8g1368 410 ProSiteProfiles 'Homeobox' domain profile. 5 77 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1368 Lan-Chr8 20534155 20546181 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1368 - - gmx:100783895 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1368 8 20534155 20546181 Lan8g1368 8 20534155 20546181 ECH